Motif Name Consensus P-value Log P-value q-value (Benjamini) # of Target Sequences with Motif(of 2385) % of Target Sequences with Motif # of Background Sequences with Motif(of 44734) % of Background Sequences with Motif Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer VGCTGWCAVB 1e-105 -2.418e+02 0.0000 901.0 37.78% 8342.8 18.65% Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer TGTCANYT 1e-99 -2.295e+02 0.0000 1366.0 57.27% 16033.4 35.84% Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer YTGWCADY 1e-94 -2.173e+02 0.0000 1288.0 54.00% 14922.6 33.36% Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer AGGTGTCA 1e-89 -2.056e+02 0.0000 1298.0 54.42% 15334.9 34.28% Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer DAGGTGTBAA 1e-65 -1.505e+02 0.0000 553.0 23.19% 4853.5 10.85% Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer NBWGATAAGR 1e-61 -1.410e+02 0.0000 444.0 18.62% 3571.5 7.98% GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATAASR 1e-57 -1.334e+02 0.0000 570.0 23.90% 5351.4 11.96% TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer AGATAAGANN 1e-57 -1.318e+02 0.0000 702.0 29.43% 7276.4 16.27% Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer AGGTGTGAAM 1e-54 -1.247e+02 0.0000 519.0 21.76% 4791.2 10.71% Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer YCTTATCTBN 1e-53 -1.221e+02 0.0000 395.0 16.56% 3203.0 7.16% Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer BBCTTATCTS 1e-46 -1.066e+02 0.0000 310.0 13.00% 2357.6 5.27% NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer YTGCCAAG 1e-45 -1.055e+02 0.0000 733.0 30.73% 8302.8 18.56% Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer SAGATAAGRV 1e-45 -1.039e+02 0.0000 285.0 11.95% 2092.1 4.68% Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer AGGTGTGAAA 1e-44 -1.034e+02 0.0000 469.0 19.66% 4463.4 9.98% Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer ATTAACACCT 1e-41 -9.608e+01 0.0000 781.0 32.75% 9288.5 20.77% Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer GCTATTTTTGGM 1e-40 -9.272e+01 0.0000 299.0 12.54% 2398.8 5.36% Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer DCYAAAAATAGM 1e-39 -9.192e+01 0.0000 183.0 7.67% 1087.3 2.43% Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer AAGGTGTKAA 1e-33 -7.767e+01 0.0000 533.0 22.35% 5902.1 13.19% HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer TGCCAGCB 1e-33 -7.617e+01 0.0000 783.0 32.83% 9870.8 22.07% Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer CYAAAAATAG 1e-31 -7.362e+01 0.0000 175.0 7.34% 1172.0 2.62% Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer GCTATTTTTAGC 1e-28 -6.523e+01 0.0000 98.0 4.11% 467.2 1.04% Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer RSCACTYRAG 1e-26 -6.105e+01 0.0000 896.0 37.57% 12262.2 27.41% Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer GGTGYTGACAGS 1e-24 -5.629e+01 0.0000 151.0 6.33% 1088.5 2.43% MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer RTCATGTGAC 1e-23 -5.521e+01 0.0000 359.0 15.05% 3857.8 8.62% NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer CYTGGCABNSTGCCAR 1e-21 -4.940e+01 0.0000 188.0 7.88% 1626.3 3.64% Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer TTRAGTGSYK 1e-20 -4.782e+01 0.0000 673.0 28.22% 8993.9 20.11% Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer RRSCACTYAA 1e-20 -4.725e+01 0.0000 711.0 29.81% 9647.0 21.57% AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer CCAGGAACAG 1e-19 -4.454e+01 0.0000 1155.0 48.43% 17540.6 39.21% PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer VAGRACAKNCTGTBC 1e-19 -4.426e+01 0.0000 697.0 29.22% 9528.8 21.30% ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer RGRACASNSTGTYCYB 1e-15 -3.643e+01 0.0000 126.0 5.28% 1044.4 2.33% CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer CCATATATGGNM 1e-14 -3.282e+01 0.0000 113.0 4.74% 936.5 2.09% Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer BTBRAGTGSN 1e-12 -2.792e+01 0.0000 588.0 24.65% 8398.6 18.78% GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer VAGRACAKWCTGTYC 1e-11 -2.658e+01 0.0000 105.0 4.40% 931.6 2.08% Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer CTGGCAGSCTGCCA 1e-11 -2.608e+01 0.0000 175.0 7.34% 1894.4 4.24% TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer YCWGGAATGY 1e-11 -2.599e+01 0.0000 203.0 8.51% 2302.6 5.15% SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer AVCAGCTG 1e-11 -2.595e+01 0.0000 1357.0 56.90% 22333.7 49.93% TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer CCWGGAATGY 1e-10 -2.491e+01 0.0000 260.0 10.90% 3191.6 7.14% GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer NRGVACABNVTGTYCY 1e-10 -2.462e+01 0.0000 69.0 2.89% 519.3 1.16% Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer AAGCACTTAA 1e-10 -2.383e+01 0.0000 656.0 27.51% 9772.1 21.85% MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer TGCTGACTCA 1e-10 -2.348e+01 0.0000 298.0 12.49% 3832.0 8.57% Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer NYTAATCCYB 1e-10 -2.346e+01 0.0000 204.0 8.55% 2387.5 5.34% TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer TRCATTCCAG 1e-9 -2.259e+01 0.0000 319.0 13.38% 4199.0 9.39% Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer NAHCAGCTGD 1e-9 -2.176e+01 0.0000 435.0 18.24% 6128.9 13.70% GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer RGGATTAR 1e-9 -2.122e+01 0.0000 287.0 12.03% 3743.9 8.37% Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer ANTTMRCASBNNNGTGYKAAN 1e-8 -2.033e+01 0.0000 103.0 4.32% 1017.6 2.27% BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer GNCACGTG 1e-8 -2.017e+01 0.0000 557.0 23.35% 8273.6 18.50% Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer GWAAYHTGAKMC 1e-8 -1.993e+01 0.0000 259.0 10.86% 3349.7 7.49% Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer GKVTCADRTTWC 1e-8 -1.979e+01 0.0000 86.0 3.61% 801.5 1.79% CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer GCTAATCC 1e-8 -1.959e+01 0.0000 570.0 23.90% 8530.4 19.07% PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer AAGAACATWHTGTTC 1e-8 -1.913e+01 0.0000 87.0 3.65% 826.7 1.85% MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer AACAGCTG 1e-8 -1.868e+01 0.0000 375.0 15.72% 5281.1 11.81% THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer TRAGGTCA 1e-7 -1.760e+01 0.0000 1053.0 44.15% 17283.2 38.64% MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer RRCAGCTGYTSY 1e-7 -1.678e+01 0.0000 278.0 11.66% 3781.2 8.45% Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer BAACAGCTGT 1e-7 -1.642e+01 0.0000 258.0 10.82% 3474.8 7.77% TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer CYRCATTCCA 1e-6 -1.591e+01 0.0000 264.0 11.07% 3593.3 8.03% TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer CCWGGAATGY 1e-6 -1.549e+01 0.0000 159.0 6.67% 1954.7 4.37% CRE(bZIP)/Promoter/Homer CSGTGACGTCAC 1e-6 -1.544e+01 0.0000 78.0 3.27% 777.0 1.74% Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer DGTAAACA 1e-6 -1.482e+01 0.0000 190.0 7.97% 2458.4 5.50% Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer SCTGTCAMTCAN 1e-6 -1.430e+01 0.0000 101.0 4.23% 1126.9 2.52% NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer NVCACGTG 1e-5 -1.375e+01 0.0000 471.0 19.75% 7186.3 16.07% Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer YCATYAATCA 1e-5 -1.300e+01 0.0000 256.0 10.73% 3599.2 8.05% AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer VTGACTCATC 1e-5 -1.229e+01 0.0000 223.0 9.35% 3094.1 6.92% Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer VNRVCAGCTGGY 1e-5 -1.212e+01 0.0000 356.0 14.93% 5321.5 11.90% FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer WWTRTAAACAVG 1e-4 -1.095e+01 0.0001 182.0 7.63% 2492.0 5.57% BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer NHAACBGYYV 1e-4 -1.091e+01 0.0001 378.0 15.85% 5776.5 12.91% Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer GTCACGTGGT 1e-4 -1.065e+01 0.0002 97.0 4.07% 1171.2 2.62% Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer TWGTCTGV 1e-4 -1.032e+01 0.0002 798.0 33.46% 13269.5 29.67% PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer RTGATTKATRGN 1e-4 -1.017e+01 0.0002 208.0 8.72% 2954.5 6.61% Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer CTGTTTAC 1e-4 -1.006e+01 0.0003 472.0 19.79% 7472.8 16.71% Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer CTAATKGV 1e-4 -1.006e+01 0.0003 454.0 19.04% 7157.8 16.00% Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer NATGASTCABNN 1e-4 -1.004e+01 0.0003 108.0 4.53% 1360.0 3.04% USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer SGTCACGTGR 1e-4 -9.720e+00 0.0004 139.0 5.83% 1857.9 4.15% Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer SCTGTCAVTCAV 1e-4 -9.664e+00 0.0004 90.0 3.77% 1097.3 2.45% ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer WDNCTGGGCA 1e-4 -9.601e+00 0.0004 383.0 16.06% 5956.5 13.32% JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer RATGASTCAT 1e-4 -9.531e+00 0.0004 159.0 6.67% 2186.5 4.89% NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer VTTACGTAAYNNNNN 1e-3 -9.096e+00 0.0006 137.0 5.74% 1852.2 4.14% Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer GTCATGCHTGRCTGS 1e-3 -9.092e+00 0.0006 103.0 4.32% 1316.8 2.94% Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer WWATRTAAACAN 1e-3 -8.971e+00 0.0007 187.0 7.84% 2672.0 5.97% GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer CRGCTGBNGNSNNSAGATAA 1e-3 -8.943e+00 0.0007 48.0 2.01% 503.2 1.13% Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer TGWAAYCTGABACCB 1e-3 -8.910e+00 0.0007 19.0 0.80% 132.7 0.30% bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer KCACGTGMCN 1e-3 -8.780e+00 0.0008 283.0 11.87% 4295.6 9.60% NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer ACCATCTGTT 1e-3 -8.757e+00 0.0008 469.0 19.66% 7528.2 16.83% CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer GHCACGTG 1e-3 -8.497e+00 0.0011 162.0 6.79% 2285.7 5.11% AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer TGGCAGTTGG 1e-3 -8.414e+00 0.0011 393.0 16.48% 6223.8 13.91% Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer TGTTKCCTAGCAACM 1e-3 -8.382e+00 0.0012 279.0 11.70% 4254.4 9.51% PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GCAGCCAAGCRTGACH 1e-3 -8.185e+00 0.0014 102.0 4.28% 1335.9 2.99% Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer GATGASTCATCN 1e-3 -8.170e+00 0.0014 78.0 3.27% 964.1 2.16% Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer NNATGASTCATH 1e-3 -8.133e+00 0.0014 149.0 6.25% 2091.3 4.68% MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer GGCVGTTR 1e-3 -8.102e+00 0.0015 426.0 17.86% 6828.0 15.26% ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer GGAACAGCCG 1e-3 -8.021e+00 0.0016 198.0 8.30% 2907.0 6.50% Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer RCCACGTGGYYN 1e-3 -7.934e+00 0.0017 195.0 8.18% 2862.7 6.40% Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer VCAGCTGYTG 1e-3 -7.795e+00 0.0019 318.0 13.33% 4968.2 11.11% Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer GGATGACTCATC 1e-3 -7.725e+00 0.0020 138.0 5.79% 1932.7 4.32% Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer GATGACGTCA 1e-3 -7.713e+00 0.0020 179.0 7.51% 2608.4 5.83% Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer SCCTAGCAACAG 1e-3 -7.399e+00 0.0028 86.0 3.61% 1115.4 2.49% NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer KCCACGTGAC 1e-3 -7.364e+00 0.0028 312.0 13.08% 4898.2 10.95% BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer DATGASTCAT 1e-3 -7.346e+00 0.0028 171.0 7.17% 2496.4 5.58% Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer NAACAGCTGG 1e-3 -7.200e+00 0.0033 300.0 12.58% 4703.7 10.52% Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer RCCATMTGTT 1e-3 -7.196e+00 0.0033 529.0 22.18% 8742.8 19.55% Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer VBSYGTCTGG 1e-3 -7.191e+00 0.0033 452.0 18.95% 7371.8 16.48% Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer CTGTCTGG 1e-2 -6.799e+00 0.0047 442.0 18.53% 7232.2 16.17% PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GTCACGCTCSCTGM 1e-2 -6.390e+00 0.0070 35.0 1.47% 379.8 0.85% Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer CACAGCAGGGGG 1e-2 -6.231e+00 0.0082 187.0 7.84% 2835.2 6.34% NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer GCCATCTGTT 1e-2 -6.204e+00 0.0083 247.0 10.36% 3865.3 8.64% Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer RGCCATTAAC 1e-2 -6.117e+00 0.0090 1023.0 42.89% 17895.3 40.01% Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer DATGASTCATHN 1e-2 -6.062e+00 0.0094 174.0 7.30% 2626.5 5.87% LXH9(Homeobox)/Hct116-LXH9.V5-ChIP-Seq(GSE116822)/Homer NGCTAATTAG 1e-2 -5.943e+00 0.0105 308.0 12.91% 4949.1 11.06% FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer NVWTGTTTAC 1e-2 -5.890e+00 0.0110 229.0 9.60% 3579.9 8.00% c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer VVCCACGTGG 1e-2 -5.848e+00 0.0113 145.0 6.08% 2151.3 4.81% Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer NNVVCAGCTGBN 1e-2 -5.767e+00 0.0122 476.0 19.96% 7948.4 17.77% ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer CTGCCWVCTTTTRTA 1e-2 -5.742e+00 0.0124 132.0 5.53% 1940.1 4.34% FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer WAAGTAAACA 1e-2 -5.666e+00 0.0132 242.0 10.15% 3822.6 8.55% HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer TACGTGCV 1e-2 -5.528e+00 0.0151 69.0 2.89% 922.6 2.06% n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer VRCCACGTGG 1e-2 -5.364e+00 0.0176 188.0 7.88% 2914.6 6.52% PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer GSCTGTCACTCA 1e-2 -5.356e+00 0.0176 33.0 1.38% 376.7 0.84% SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer CAAGGHCANV 1e-2 -5.207e+00 0.0202 122.0 5.12% 1805.6 4.04% ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer TGGGGAAGGGCM 1e-2 -4.973e+00 0.0253 183.0 7.67% 2858.4 6.39% HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer TGATKGATGR 1e-2 -4.946e+00 0.0258 64.0 2.68% 867.2 1.94% TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer GTCACGTGACYV 1e-2 -4.849e+00 0.0282 24.0 1.01% 259.4 0.58% HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer GYCATCMATCAT 1e-2 -4.687e+00 0.0329 30.0 1.26% 350.3 0.78% FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer NYYTGTTTACHN 1e-1 -4.542e+00 0.0377 87.0 3.65% 1261.0 2.82% Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer TGCTGAGTCA 1e-1 -4.491e+00 0.0393 62.0 2.60% 855.8 1.91% Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer AGGTGHCAGACA 1e-1 -4.415e+00 0.0421 65.0 2.73% 907.7 2.03% Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer CGGTCACSCCAC 1e-1 -4.161e+00 0.0538 40.0 1.68% 519.2 1.16% Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer HTTTCCCASG 1e-1 -4.123e+00 0.0554 354.0 14.84% 5956.5 13.32% Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer BTCAAGGTCA 1e-1 -3.943e+00 0.0658 170.0 7.13% 2718.6 6.08% MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer WNTGCTGASTCAGCANWTTY 1e-1 -3.917e+00 0.0671 107.0 4.49% 1635.8 3.66% RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer RGGTCADNNAGAGGTCAV 1e-1 -3.886e+00 0.0686 12.0 0.50% 113.3 0.25% HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer RTACGTGC 1e-1 -3.796e+00 0.0745 248.0 10.40% 4104.8 9.18% Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer ADBTAATTAR 1e-1 -3.748e+00 0.0776 339.0 14.21% 5734.4 12.82% Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer VGCCATAAAA 1e-1 -3.631e+00 0.0865 503.0 21.09% 8717.7 19.49% HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer GCACGTACCC 1e-1 -3.587e+00 0.0898 87.0 3.65% 1318.3 2.95% ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer GNCTGTASTRNTGBCTCHTT 1e-1 -3.438e+00 0.1033 10.0 0.42% 94.9 0.21% PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer MGGAAGTGAAAC 1e-1 -3.373e+00 0.1095 277.0 11.61% 4670.7 10.44% HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer RTTATGYAAB 1e-1 -3.365e+00 0.1096 160.0 6.71% 2596.2 5.80% TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer SMCATCTGKH 1e-1 -3.275e+00 0.1190 438.0 18.36% 7590.0 16.97% Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer GKTAATGR 1e-1 -3.271e+00 0.1190 551.0 23.10% 9652.7 21.58% Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer RTCACSCCAY 1e-1 -3.218e+00 0.1242 62.0 2.60% 920.7 2.06% Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer GGYAATGAAA 1e-1 -3.189e+00 0.1269 126.0 5.28% 2018.6 4.51% GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NNNNNBAGATAWYATCTVHN 1e-1 -3.117e+00 0.1354 41.0 1.72% 578.4 1.29% ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer GAGCCTGGTACTGWGCCTGR 1e-1 -3.100e+00 0.1368 84.0 3.52% 1300.7 2.91% Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer CYTGTTTACWYW 1e-1 -3.097e+00 0.1368 174.0 7.30% 2869.9 6.42% PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer ADGGYAGYAGCATCT 1e-1 -3.094e+00 0.1368 118.0 4.95% 1887.6 4.22% Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer HDGYAATGAAAN 1e-1 -3.074e+00 0.1375 363.0 15.22% 6260.8 14.00% Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer KGTTGCCATGGCAA 1e-1 -3.045e+00 0.1405 47.0 1.97% 680.0 1.52% Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer BTCAAGGTCA 1e-1 -3.029e+00 0.1417 119.0 4.99% 1910.1 4.27% Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer NNTGTGGATTSS 1e-1 -2.986e+00 0.1469 136.0 5.70% 2211.5 4.94% CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer ATTGCGCAAC 1e-1 -2.976e+00 0.1475 122.0 5.12% 1967.7 4.40% FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer TGTTTAYTTAGC 1e-1 -2.970e+00 0.1475 157.0 6.58% 2582.9 5.77% PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer ACCRTGACTAATTNN 1e-1 -2.927e+00 0.1528 43.0 1.80% 620.9 1.39% DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer YDGHTACAWTGTADC 1e-1 -2.912e+00 0.1542 39.0 1.64% 555.4 1.24% Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer TTTTATGGCM 1e-1 -2.890e+00 0.1565 467.0 19.58% 8182.7 18.29% MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer DGCACACGTG 1e-1 -2.862e+00 0.1599 272.0 11.40% 4648.0 10.39% ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer RGGGCACTAACY 1e-1 -2.846e+00 0.1614 163.0 6.83% 2701.7 6.04% Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer RGCAATNAAA 1e-1 -2.811e+00 0.1661 599.0 25.12% 10617.9 23.74% BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer NAMCAGCTGK 1e-1 -2.800e+00 0.1669 389.0 16.31% 6775.9 15.15% CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer DRTGTTGCAA 1e-1 -2.789e+00 0.1675 171.0 7.17% 2849.4 6.37% Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer NNYTAATTAR 1e-1 -2.788e+00 0.1675 211.0 8.85% 3562.8 7.96% Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer TAATCCCN 1e-1 -2.786e+00 0.1675 889.0 37.27% 15986.8 35.74% THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer GGTCANYTGAGGWCA 1e-1 -2.776e+00 0.1675 105.0 4.40% 1688.7 3.78% c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer VCCACGTG 1e-1 -2.729e+00 0.1736 100.0 4.19% 1605.5 3.59% ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer GTGACCTTGRVN 1e-1 -2.720e+00 0.1740 191.0 8.01% 3213.6 7.18% RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer CGGTTGCCATGGCAAC 1e-1 -2.710e+00 0.1747 18.0 0.75% 227.2 0.51% Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer TGATTRATGGCY 1e-1 -2.702e+00 0.1750 49.0 2.05% 732.1 1.64% bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer NAGTTTCABTHTGACTNW 1e-1 -2.587e+00 0.1952 82.0 3.44% 1304.9 2.92% Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer NCYAATAAAA 1e-1 -2.521e+00 0.2073 300.0 12.58% 5203.7 11.63% Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer GCCACACCCA 1e-1 -2.513e+00 0.2076 73.0 3.06% 1154.3 2.58% Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer MCAGCTGBYH 1e-1 -2.503e+00 0.2086 486.0 20.38% 8601.3 19.23% Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer GGCCYCCTGCTGDGH 1e-1 -2.434e+00 0.2220 159.0 6.67% 2676.6 5.98% NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer SARTGGAAAAWRTGAGTCAB 1e-1 -2.405e+00 0.2273 39.0 1.64% 581.1 1.30% Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer GGGGGGGG 1e-1 -2.404e+00 0.2273 222.0 9.31% 3810.9 8.52% NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer GATGACTCAGCA 1e-1 -2.378e+00 0.2308 18.0 0.75% 239.0 0.53% p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer ACATGCCCGGGCAT 1e-1 -2.371e+00 0.2311 6.0 0.25% 58.3 0.13% Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer NDGTAATTAC 1e-1 -2.321e+00 0.2416 117.0 4.91% 1942.5 4.34% FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer SCHTGTTTACAT 1e-1 -2.314e+00 0.2417 136.0 5.70% 2280.2 5.10% ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer GAGSCCGAGC 1e-1 -2.308e+00 0.2418 45.0 1.89% 688.2 1.54% Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer TGACANARRCCAGRC 1e0 -2.295e+00 0.2437 132.0 5.53% 2211.9 4.94% PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer GGAAGTGAAAST 1e0 -2.292e+00 0.2437 44.0 1.84% 672.8 1.50% ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer AAGGKGRCGCAGGCA 1e0 -2.280e+00 0.2446 34.0 1.43% 504.4 1.13% EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer GGYAGCAYDTGCTDCCCNNN 1e0 -2.278e+00 0.2446 5.0 0.21% 46.5 0.10% EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer NWGGGTGTGGCY 1e0 -2.263e+00 0.2460 48.0 2.01% 742.5 1.66% Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer GCCACRCCCACY 1e0 -2.225e+00 0.2541 63.0 2.64% 1003.4 2.24% Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer CCTGCTGAGH 1e0 -2.162e+00 0.2691 222.0 9.31% 3845.6 8.60% Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer MTGATGCAAT 1e0 -2.158e+00 0.2691 65.0 2.73% 1043.4 2.33% IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer CTTTCANTATGACTV 1e0 -2.122e+00 0.2771 23.0 0.96% 329.3 0.74% E-box(bHLH)/Promoter/Homer SSGGTCACGTGA 1e0 -2.103e+00 0.2809 17.0 0.71% 232.3 0.52% PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer NGTGTTCAVTSAAGCGKAAA 1e0 -2.080e+00 0.2861 21.0 0.88% 298.9 0.67% WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer MCTCCCMCRCAB 1e0 -2.016e+00 0.3031 126.0 5.28% 2136.1 4.78% Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer NRAACCRGTTYRAACCRGYT 1e0 -1.979e+00 0.3131 31.0 1.30% 470.4 1.05% RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer AAYTAGGTCA 1e0 -1.978e+00 0.3131 32.0 1.34% 487.5 1.09% RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer AAYTAGGTCA 1e0 -1.978e+00 0.3131 32.0 1.34% 487.5 1.09% Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer TAATTAGN 1e0 -1.969e+00 0.3131 202.0 8.47% 3512.1 7.85% ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer AGGAARCAGCTG 1e0 -1.958e+00 0.3131 25.0 1.05% 370.3 0.83% OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer ATGAATWATTCATGA 1e0 -1.914e+00 0.3255 4.0 0.17% 38.5 0.09% HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer TTTTATKRGG 1e0 -1.902e+00 0.3277 183.0 7.67% 3178.6 7.11% Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer GGCMATGAAA 1e0 -1.884e+00 0.3318 233.0 9.77% 4089.2 9.14% ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer GTCWGCTGTYYCTCT 1e0 -1.842e+00 0.3444 25.0 1.05% 376.1 0.84% Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer TYTGACCASWRG 1e0 -1.833e+00 0.3458 187.0 7.84% 3261.3 7.29% p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer NRRRCAWGTCCDGRCATGYY 1e0 -1.818e+00 0.3493 13.0 0.55% 178.4 0.40% FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer WAAGTAAACA 1e0 -1.815e+00 0.3493 166.0 6.96% 2883.5 6.45% Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer AAACMATTAN 1e0 -1.809e+00 0.3493 82.0 3.44% 1375.0 3.07% DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer TWGHWACAWTGTWDC 1e0 -1.800e+00 0.3504 41.0 1.72% 653.2 1.46% Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer CCATTGTTNY 1e0 -1.778e+00 0.3564 315.0 13.21% 5608.4 12.54% ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer VAGGTCACNSTGACC 1e0 -1.744e+00 0.3667 64.0 2.68% 1061.6 2.37% Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer ATTGCATCAT 1e0 -1.735e+00 0.3684 48.0 2.01% 780.0 1.74% Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer NGRTGACGTCAY 1e0 -1.728e+00 0.3689 110.0 4.61% 1884.9 4.21% FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer AGGTCANTGACCTB 1e0 -1.694e+00 0.3802 93.0 3.90% 1583.4 3.54% Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer TGCGTGGGYG 1e0 -1.685e+00 0.3818 126.0 5.28% 2178.4 4.87% JunD(bZIP)/K562-JunD-ChIP-Seq/Homer ATGACGTCATCN 1e0 -1.681e+00 0.3818 19.0 0.80% 284.0 0.63% Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer BSNTGTTTACWYWGN 1e0 -1.677e+00 0.3818 58.0 2.43% 961.3 2.15% DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer BCWGATTCAATCAAN 1e0 -1.650e+00 0.3896 1.0 0.04% 4.1 0.01% Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer KTGACCTTGA 1e0 -1.582e+00 0.4148 140.0 5.87% 2446.6 5.47% PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer TGGTACATTCCA 1e0 -1.571e+00 0.4175 142.0 5.95% 2484.4 5.55% bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer KCACGTGMCN 1e0 -1.523e+00 0.4362 69.0 2.89% 1172.9 2.62% OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAACAATG 1e0 -1.511e+00 0.4395 28.0 1.17% 447.6 1.00% p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer NNDRCATGYCYNRRCATGYH 1e0 -1.509e+00 0.4395 78.0 3.27% 1335.8 2.99% IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer ACTGAAACCA 1e0 -1.500e+00 0.4401 80.0 3.35% 1372.7 3.07% ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer GRTGMTRGAGCC 1e0 -1.486e+00 0.4442 126.0 5.28% 2206.3 4.93% KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer MKGGGYGTGGCC 1e0 -1.454e+00 0.4568 198.0 8.30% 3526.5 7.88% Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer CAAAGGTCAG 1e0 -1.434e+00 0.4637 501.0 21.01% 9125.4 20.40% Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer SSRGCAGCTGCH 1e0 -1.429e+00 0.4639 318.0 13.33% 5739.3 12.83% KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer DGGGYGKGGC 1e0 -1.424e+00 0.4639 248.0 10.40% 4450.9 9.95% Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer CYHATAAAAN 1e0 -1.421e+00 0.4639 469.0 19.66% 8535.1 19.08% Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer SVYTTCCNGGAARB 1e0 -1.411e+00 0.4658 146.0 6.12% 2582.9 5.77% MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer GCTGASTCAGCA 1e0 -1.411e+00 0.4658 54.0 2.26% 915.8 2.05% CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer TGCAGTTCCMVNWRTGGCCA 1e0 -1.355e+00 0.4887 5.0 0.21% 64.5 0.14% GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer AAACYKGTTWDACMRGTTTB 1e0 -1.270e+00 0.5293 71.0 2.98% 1237.9 2.77% KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer GGGGGTGTGTCC 1e0 -1.258e+00 0.5336 127.0 5.32% 2260.7 5.05% Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer NNNVCTGWGYAAACASN 1e0 -1.247e+00 0.5370 235.0 9.85% 4249.3 9.50% Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer CCCCTCCCCCAC 1e0 -1.234e+00 0.5418 27.0 1.13% 449.2 1.00% PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer ACTTTCACTTTC 1e0 -1.218e+00 0.5479 106.0 4.44% 1882.7 4.21% YY1(Zf)/Promoter/Homer CAAGATGGCGGC 1e0 -1.178e+00 0.5679 11.0 0.46% 171.7 0.38% ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer ATTTCCCAGVAKSCY 1e0 -1.164e+00 0.5734 73.0 3.06% 1287.3 2.88% Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCHGATTAC 1e0 -1.152e+00 0.5779 3.0 0.13% 37.3 0.08% Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer TGACCTTTNCNT 1e0 -1.141e+00 0.5817 35.0 1.47% 600.4 1.34% Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer NANTGCSGCA 1e0 -1.135e+00 0.5827 50.0 2.10% 872.1 1.95% FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer AGTAAACAAAAAAGAACAND 1e0 -1.115e+00 0.5921 8.0 0.34% 122.2 0.27% NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer AWWWTGCTGAGTCAT 1e0 -1.089e+00 0.6052 12.0 0.50% 193.1 0.43% Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer GTTGCCATGGCAACM 1e0 -1.085e+00 0.6052 16.0 0.67% 264.5 0.59% Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer CTTCCGGGAA 1e0 -1.067e+00 0.6136 94.0 3.94% 1686.7 3.77% Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer NRRTGACGTCAT 1e0 -1.058e+00 0.6162 74.0 3.10% 1320.8 2.95% MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer TTCAAAWTAAAAGTC 1e0 -1.049e+00 0.6194 36.0 1.51% 627.6 1.40% Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer HTGCTGAGTCAT 1e0 -9.705e-01 0.6674 10.0 0.42% 164.4 0.37% RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer WAABTAGGTCAV 1e0 -9.666e-01 0.6674 18.0 0.75% 308.8 0.69% Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer SSCMATWAAA 1e0 -9.647e-01 0.6674 104.0 4.36% 1888.0 4.22% TATA-Box(TBP)/Promoter/Homer CCTTTTAWAGSC 1e0 -9.509e-01 0.6723 218.0 9.14% 4006.1 8.96% ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer GGVTCTCGCGAGAAC 1e0 -9.471e-01 0.6723 3.0 0.13% 42.6 0.10% THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer GGTCACCTGAGGTCA 1e0 -9.397e-01 0.6744 133.0 5.58% 2430.2 5.43% Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer TTAATTNAATTA 1e0 -9.189e-01 0.6858 24.0 1.01% 421.8 0.94% Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer GGGGCTYGKCTGGGA 1e0 -9.110e-01 0.6885 42.0 1.76% 752.5 1.68% E2F(E2F)/Hela-CellCycle-Expression/Homer TTSGCGCGAAAA 1e0 -9.108e-01 0.6885 5.0 0.21% 78.3 0.18% Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer ACAGCTGTTN 1e0 -8.875e-01 0.6992 729.0 30.57% 13570.1 30.34% LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer RGGTTACTANAGGTCA 1e0 -8.804e-01 0.7014 9.0 0.38% 151.9 0.34% Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer RGKGGGCGGAGC 1e0 -8.634e-01 0.7106 155.0 6.50% 2856.6 6.39% p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer RRCATGYCYRGRCATGYYYN 1e0 -8.373e-01 0.7237 20.0 0.84% 355.6 0.80% p53(p53)/Saos-p53-ChIP-Seq/Homer RRCATGYCYRGRCATGYYYN 1e0 -8.373e-01 0.7237 20.0 0.84% 355.6 0.80% NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer GGAAATTCCC 1e0 -8.160e-01 0.7364 10.0 0.42% 173.3 0.39% FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer TRTTTACTTW 1e0 -8.077e-01 0.7397 172.0 7.21% 3187.7 7.13% Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer GGCCATAAATCA 1e0 -7.921e-01 0.7484 87.0 3.65% 1605.5 3.59% Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer AWWNTGCTGAGTCAT 1e0 -7.892e-01 0.7484 13.0 0.55% 230.0 0.51% LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer CCTTTGATST 1e0 -7.794e-01 0.7521 124.0 5.20% 2298.7 5.14% X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer GGTTGCCATGGCAA 1e0 -7.768e-01 0.7521 19.0 0.80% 342.6 0.77% Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer CCWTTGTYYB 1e0 -7.648e-01 0.7575 332.0 13.92% 6192.3 13.84% Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer ASWTCAAAGG 1e0 -7.366e-01 0.7761 45.0 1.89% 831.6 1.86% Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer YTAATTRAWWCCAGATGT 1e0 -7.360e-01 0.7761 33.0 1.38% 607.0 1.36% RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer TAGGGCAAAGGTCA 1e0 -7.315e-01 0.7761 241.0 10.10% 4500.9 10.06% ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer GARTGGTCATCGCCC 1e0 -6.990e-01 0.7968 17.0 0.71% 312.7 0.70% ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer AGGCCTRG 1e0 -6.948e-01 0.7972 307.0 12.87% 5750.9 12.86% BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer CNNBRGCGCCCCCTGSTGGC 1e0 -6.878e-01 0.7998 30.0 1.26% 557.8 1.25% c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer ATGACGTCATCY 1e0 -6.712e-01 0.8102 64.0 2.68% 1198.7 2.68% Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer HAWGRGGCCM 1e0 -6.631e-01 0.8137 655.0 27.46% 12292.8 27.48% RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer AAWCTAGGTCARDNN 1e0 -6.626e-01 0.8137 26.0 1.09% 485.9 1.09% CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer AYAGTGCCMYCTRGTGGCCA 1e0 -6.524e-01 0.8165 21.0 0.88% 392.4 0.88% ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer MACCTTCYATGGCTCCCTAKTGCCY 1e0 -6.461e-01 0.8187 3.0 0.13% 52.7 0.12% PSE(SNAPc)/K562-mStart-Seq/Homer WAVTCACCMTAASYDAAAAG 1e0 -6.441e-01 0.8187 87.0 3.65% 1637.0 3.66% Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer CTTTGATGTGSB 1e0 -6.114e-01 0.8414 62.0 2.60% 1172.1 2.62% Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer YGGCCCCGCCCC 1e0 -5.934e-01 0.8536 276.0 11.57% 5208.4 11.64% STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer NYTTCCWGGAAR 1e0 -5.700e-01 0.8707 181.0 7.59% 3428.5 7.66% Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer YCTTTGTTCC 1e0 -5.413e-01 0.8928 157.0 6.58% 2985.7 6.67% TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer ACWTCAAAGG 1e0 -5.371e-01 0.8933 13.0 0.55% 252.1 0.56% KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer NRGCCCCRCCCHBNN 1e0 -5.223e-01 0.9034 65.0 2.73% 1248.5 2.79% MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer HWWGTCAGCAWWTTT 1e0 -5.206e-01 0.9034 53.0 2.22% 1020.5 2.28% ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer TGGAACAGMA 1e0 -5.178e-01 0.9034 170.0 7.13% 3239.4 7.24% E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer BTKGGCGGGAAA 1e0 -5.143e-01 0.9034 70.0 2.94% 1345.3 3.01% RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer AGGTCAAGGTCA 1e0 -5.104e-01 0.9034 6.0 0.25% 118.1 0.26% NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer WNTGTTTRYTTTGGCA 1e0 -5.027e-01 0.9052 8.0 0.34% 158.6 0.35% AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer ATGCCCTGAGGC 1e0 -4.967e-01 0.9075 168.0 7.04% 3209.3 7.17% Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCAATTA 1e0 -4.943e-01 0.9075 10.0 0.42% 198.4 0.44% ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer AGGCCTAG 1e0 -4.928e-01 0.9075 395.0 16.56% 7497.9 16.76% Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer VCAKCTGGNNNCCAGMTGBN 1e0 -4.829e-01 0.9106 34.0 1.43% 664.2 1.48% Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer ATGAATATTC 1e0 -4.818e-01 0.9106 13.0 0.55% 258.7 0.58% NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer WGGGGATTTCCC 1e0 -4.713e-01 0.9149 87.0 3.65% 1680.9 3.76% KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer RGKGGGCGKGGC 1e0 -4.672e-01 0.9156 300.0 12.58% 5718.5 12.78% RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer TTGAMCTTTG 1e0 -4.577e-01 0.9211 589.0 24.70% 11173.1 24.98% CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer NGYCATAAAWCH 1e0 -4.538e-01 0.9216 134.0 5.62% 2580.4 5.77% GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATGKDGAGATAAG 1e0 -4.416e-01 0.9297 12.0 0.50% 243.5 0.54% Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer BCCATTGTTC 1e0 -4.279e-01 0.9394 147.0 6.16% 2837.3 6.34% Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer NTAATTDGCYAATTANNWWD 1e0 -4.230e-01 0.9409 2.0 0.08% 42.1 0.09% Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer WATGCAAATGAG 1e0 -4.183e-01 0.9421 64.0 2.68% 1255.4 2.81% RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer GCTGTGGTTW 1e0 -4.165e-01 0.9421 161.0 6.75% 3108.4 6.95% AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer SCCTSAGGSCAW 1e0 -4.120e-01 0.9421 221.0 9.27% 4250.9 9.50% COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer AGRGGTCA 1e0 -3.896e-01 0.9599 363.0 15.22% 6953.0 15.54% EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer VACAGGAAAT 1e0 -3.811e-01 0.9650 109.0 4.57% 2130.4 4.76% ETS(ETS)/Promoter/Homer AACCGGAAGT 1e0 -3.806e-01 0.9650 47.0 1.97% 937.8 2.10% PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer AGAGGAAGTG 1e0 -3.668e-01 0.9724 96.0 4.03% 1886.6 4.22% Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer MAATCACTGC 1e0 -3.571e-01 0.9787 139.0 5.83% 2714.2 6.07% Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer GYMATAAAAH 1e0 -3.338e-01 0.9985 94.0 3.94% 1860.2 4.16% Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer TBGCACGCAA 1e0 -3.299e-01 0.9991 121.0 5.07% 2381.2 5.32% Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer CVGTSCTCCC 1e0 -3.266e-01 0.9992 414.0 17.36% 7962.2 17.80% ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer AGAAATGACTTCCCT 1e0 -3.258e-01 0.9992 1.0 0.04% 24.1 0.05% EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer DGTCCCYRGGGA 1e0 -3.130e-01 1.0000 38.0 1.59% 779.8 1.74% ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer ARGAGGMCAAAATGW 1e0 -3.088e-01 1.0000 24.0 1.01% 503.5 1.13% CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer TATCGATNAN 1e0 -2.947e-01 1.0000 103.0 4.32% 2050.9 4.58% CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer NTNATGCAAYMNNHTGMAAY 1e0 -2.936e-01 1.0000 19.0 0.80% 406.5 0.91% HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer TWVGGTCCGC 1e0 -2.865e-01 1.0000 23.0 0.96% 488.7 1.09% SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer ASWTCCTGBT 1e0 -2.865e-01 1.0000 205.0 8.60% 4014.3 8.97% NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer ATTTTCCATT 1e0 -2.822e-01 1.0000 165.0 6.92% 3250.3 7.27% Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer CCWTTGTY 1e0 -2.749e-01 1.0000 329.0 13.79% 6388.2 14.28% Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer AGGVNCCTTTGT 1e0 -2.720e-01 1.0000 170.0 7.13% 3352.3 7.49% RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer NWAACCACADNN 1e0 -2.713e-01 1.0000 178.0 7.46% 3507.0 7.84% NFY(CCAAT)/Promoter/Homer RGCCAATSRG 1e0 -2.697e-01 1.0000 139.0 5.83% 2757.9 6.17% RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer GGGRAARRGRMCAGMTG 1e0 -2.674e-01 1.0000 68.0 2.85% 1382.9 3.09% HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer CARRGKBCAAAGTYCA 1e0 -2.570e-01 1.0000 85.0 3.56% 1718.6 3.84% ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer YTKGATAHAGTATTCTWGGTNGGCA 1e0 -2.477e-01 1.0000 10.0 0.42% 230.7 0.52% NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer GGGGGAATCCCC 1e0 -2.404e-01 1.0000 14.0 0.59% 315.5 0.71% REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer GGMGCTGTCCATGGTGCTGA 1e0 -2.394e-01 1.0000 1.0 0.04% 29.9 0.07% Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer NNAYTTCCTGHN 1e0 -2.386e-01 1.0000 182.0 7.63% 3604.4 8.06% IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer GAAAGTGAAAGT 1e0 -2.359e-01 1.0000 17.0 0.71% 378.6 0.85% Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer ATGCATAATTCA 1e0 -2.240e-01 1.0000 45.0 1.89% 946.2 2.12% IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer GAAASYGAAASY 1e0 -2.135e-01 1.0000 12.0 0.50% 279.6 0.63% E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer DNRCAGCTGY 1e0 -2.112e-01 1.0000 389.0 16.31% 7588.4 16.96% ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer NGNTCTAGAACCNGV 1e0 -2.105e-01 1.0000 68.0 2.85% 1407.6 3.15% PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer VNAGGKCAAAGGTCA 1e0 -2.105e-01 1.0000 204.0 8.55% 4048.4 9.05% GFY-Staf(?,Zf)/Promoter/Homer RACTACAATTCCCAGAAKGC 1e0 -2.033e-01 1.0000 5.0 0.21% 129.9 0.29% NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer CTGCGCATGCGC 1e0 -2.010e-01 1.0000 7.0 0.29% 174.3 0.39% IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer AGTTTCAKTTTC 1e0 -1.939e-01 1.0000 41.0 1.72% 878.3 1.96% SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer AAAGRGGAAGTG 1e0 -1.805e-01 1.0000 37.0 1.55% 803.7 1.80% ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer ACAGGAAGTG 1e0 -1.717e-01 1.0000 213.0 8.93% 4255.0 9.51% Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer NTAATBNAATTA 1e0 -1.640e-01 1.0000 74.0 3.10% 1551.4 3.47% Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer HACTTCCGGY 1e0 -1.548e-01 1.0000 79.0 3.31% 1656.4 3.70% Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer CCATTGTTYB 1e0 -1.522e-01 1.0000 121.0 5.07% 2485.5 5.56% Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer MACAGGAAGT 1e0 -1.464e-01 1.0000 61.0 2.56% 1303.6 2.91% E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer VDTTTCCCGCCA 1e0 -1.449e-01 1.0000 7.0 0.29% 186.7 0.42% COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer GKBCARAGGTCA 1e0 -1.405e-01 1.0000 289.0 12.12% 5754.1 12.86% Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer NRYTTCCGGH 1e0 -1.395e-01 1.0000 202.0 8.47% 4075.3 9.11% GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer CTCCCTGGGAGGCCN 1e0 -1.342e-01 1.0000 301.0 12.62% 5993.1 13.40% ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer RCAGGATGTGGT 1e0 -1.336e-01 1.0000 14.0 0.59% 344.5 0.77% Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer TAAYCYAATCAA 1e0 -1.333e-01 1.0000 7.0 0.29% 189.2 0.42% Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer RACTACAACTCCCAGVAKGC 1e0 -1.312e-01 1.0000 2.0 0.08% 69.0 0.15% ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer RHHCAGAGAGGB 1e0 -1.311e-01 1.0000 5.0 0.21% 143.3 0.32% RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer AGGTCAAGGTCA 1e0 -1.271e-01 1.0000 17.0 0.71% 411.3 0.92% Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer TATGCWAATBAV 1e0 -1.207e-01 1.0000 38.0 1.59% 853.6 1.91% OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer ATGCATWATGCATRW 1e0 -1.201e-01 1.0000 117.0 4.91% 2435.8 5.45% ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer TTAACCCTTTVNKKN 1e0 -1.184e-01 1.0000 30.0 1.26% 689.8 1.54% EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer NRBCARRGGTCA 1e0 -1.173e-01 1.0000 268.0 11.24% 5380.5 12.03% ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer AACATCTGGA 1e0 -1.160e-01 1.0000 117.0 4.91% 2439.9 5.45% NRF(NRF)/Promoter/Homer STGCGCATGCGC 1e0 -1.099e-01 1.0000 15.0 0.63% 375.0 0.84% PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer YCCDNTCCAGGTTTT 1e0 -1.047e-01 1.0000 181.0 7.59% 3708.8 8.29% Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer YTAATYNRATTA 1e0 -1.023e-01 1.0000 40.0 1.68% 906.8 2.03% GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer RACCGGAAGT 1e0 -1.022e-01 1.0000 158.0 6.62% 3261.8 7.29% Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer NGCGTGGGCGGR 1e0 -1.017e-01 1.0000 20.0 0.84% 487.1 1.09% Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer CCATTGTATGCAAAT 1e0 -1.002e-01 1.0000 17.0 0.71% 423.9 0.95% EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer GTCCCCWGGGGA 1e0 -9.831e-02 1.0000 213.0 8.93% 4341.9 9.71% EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer NABTCCCWDGGGAVH 1e0 -9.111e-02 1.0000 176.0 7.38% 3629.4 8.11% ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer AVCCGGAAGT 1e0 -8.545e-02 1.0000 72.0 3.02% 1573.7 3.52% Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer ACTYKNATTCGTGNTACTTC 1e0 -8.208e-02 1.0000 7.0 0.29% 206.6 0.46% EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer ATTTCCTGTN 1e0 -7.646e-02 1.0000 131.0 5.49% 2764.7 6.18% Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer GTRGGTCASTGGGTCA 1e0 -7.288e-02 1.0000 24.0 1.01% 591.5 1.32% ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer ACAGGAAGTG 1e0 -7.161e-02 1.0000 326.0 13.67% 6583.9 14.72% Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAW 1e0 -7.104e-02 1.0000 63.0 2.64% 1406.6 3.14% CHR(?)/Hela-CellCycle-Expression/Homer SRGTTTCAAA 1e0 -7.102e-02 1.0000 78.0 3.27% 1711.5 3.83% HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer BSTTCTRGAABVTTCYAGAA 1e0 -6.503e-02 1.0000 21.0 0.88% 532.1 1.19% DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer NWTAAYCYAATCAWN 1e0 -6.255e-02 1.0000 3.0 0.13% 113.6 0.25% HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer VCAGCTGBNN 1e0 -6.100e-02 1.0000 491.0 20.59% 9789.0 21.88% Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer ATGMATATDC 1e0 -5.875e-02 1.0000 156.0 6.54% 3290.3 7.36% Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer ACTTCCKGKT 1e0 -5.803e-02 1.0000 186.0 7.80% 3884.3 8.68% RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer SAAACCACAG 1e0 -5.175e-02 1.0000 147.0 6.16% 3126.0 6.99% TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer GAGGTCAAAGGTCA 1e0 -5.011e-02 1.0000 14.0 0.59% 388.3 0.87% E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer CWGGCGGGAA 1e0 -4.895e-02 1.0000 14.0 0.59% 389.8 0.87% HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer GTTAATNATTAA 1e0 -4.755e-02 1.0000 12.0 0.50% 344.7 0.77% ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer GCACAYAGTAGGKCY 1e0 -4.641e-02 1.0000 4.0 0.17% 148.8 0.33% ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer ANCAGGAAGT 1e0 -4.499e-02 1.0000 130.0 5.45% 2802.4 6.27% IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer GRAASTGAAAST 1e0 -4.482e-02 1.0000 42.0 1.76% 1004.8 2.25% Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer NRYTTCCGGY 1e0 -4.108e-02 1.0000 70.0 2.94% 1594.6 3.56% Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer RAACAATGGN 1e0 -4.021e-02 1.0000 169.0 7.09% 3592.3 8.03% Sp1(Zf)/Promoter/Homer GGCCCCGCCCCC 1e0 -3.382e-02 1.0000 13.0 0.55% 381.7 0.85% ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer ACCGGAAGTG 1e0 -3.327e-02 1.0000 195.0 8.18% 4130.5 9.23% ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer AACCGGAAGT 1e0 -2.815e-02 1.0000 258.0 10.82% 5394.3 12.06% GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATSTNDNNDSAGATAASN 1e0 -2.696e-02 1.0000 9.0 0.38% 293.4 0.66% VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer ARAGGTCANWGAGTTCANNN 1e0 -2.675e-02 1.0000 28.0 1.17% 732.7 1.64% GFY(?)/Promoter/Homer ACTACAATTCCC 1e0 -2.665e-02 1.0000 6.0 0.25% 217.7 0.49% PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer TGACCTTTGCCCCA 1e0 -2.430e-02 1.0000 168.0 7.04% 3628.6 8.11% ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer ACVAGGAAGT 1e0 -2.252e-02 1.0000 122.0 5.12% 2709.2 6.06% Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer GATTTGCATA 1e0 -2.193e-02 1.0000 38.0 1.59% 962.6 2.15% E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer GGCGGGAARN 1e0 -1.869e-02 1.0000 45.0 1.89% 1123.1 2.51% ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer GTGGGCCCCA 1e0 -1.774e-02 1.0000 19.0 0.80% 548.7 1.23% ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer AGTTTCASTTTC 1e0 -1.769e-02 1.0000 3.0 0.13% 144.4 0.32% Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer GGTTAAWCATTAA 1e0 -1.646e-02 1.0000 8.0 0.34% 284.5 0.64% GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NAGATWNBNATCTNN 1e0 -1.628e-02 1.0000 9.0 0.38% 310.1 0.69% STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer NATTTCCNGGAAAT 1e0 -1.380e-02 1.0000 36.0 1.51% 944.8 2.11% ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer CCTCATGGTGYCYTWYTCCCTTGTG 1e0 -9.672e-03 1.0000 1.0 0.04% 87.2 0.19% RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer AAACCACARM 1e0 -9.523e-03 1.0000 202.0 8.47% 4408.1 9.85% ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer SMCAGTCWGAKGGAGGAGGC 1e0 -9.509e-03 1.0000 6.0 0.25% 247.9 0.55% Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer ATATGCAAAT 1e0 -5.143e-03 1.0000 31.0 1.30% 881.3 1.97% Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer NNNCTTTCCAGGAAA 1e0 -3.165e-03 1.0000 239.0 10.02% 5263.6 11.77% STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer RTTTCTNAGAAA 1e0 -3.009e-03 1.0000 43.0 1.80% 1180.9 2.64% SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer GCAACAGGTG 1e0 -2.950e-03 1.0000 45.0 1.89% 1226.3 2.74% Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer HNRAATCAAT 1e0 -1.147e-03 1.0000 50.0 2.10% 1387.2 3.10% Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer SNGCACCTGCHS 1e0 -9.680e-04 1.0000 110.0 4.61% 2706.7 6.05% GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer CGTGGGTGGTCC 1e0 -7.260e-04 1.0000 11.0 0.46% 461.1 1.03% STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer ABTTCYYRRGAA 1e0 -5.370e-04 1.0000 72.0 3.02% 1919.5 4.29% Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer TATTGAYY 1e0 -4.430e-04 1.0000 127.0 5.32% 3120.8 6.98% EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer AVCAGGAAGT 1e0 -4.410e-04 1.0000 214.0 8.97% 4933.7 11.03% HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer NTATYGATCH 1e0 -3.710e-04 1.0000 63.0 2.64% 1738.7 3.89% STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer TTCCKNAGAA 1e0 -1.210e-04 1.0000 73.0 3.06% 2021.2 4.52% E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer GGCGGGAAAH 1e0 -1.180e-04 1.0000 30.0 1.26% 1015.3 2.27% OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer YATGCATATRCATRT 1e0 -5.800e-05 1.0000 4.0 0.17% 310.6 0.69% PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer RGGTCTCTAACY 1e0 -4.500e-05 1.0000 29.0 1.22% 1026.1 2.29% Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer YSTGGGTGGTCT 1e0 -1.300e-05 1.0000 31.0 1.30% 1120.8 2.51% HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer TTCTAGAABNTTCTA 1e0 -1.100e-05 1.0000 17.0 0.71% 753.3 1.68% E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer NVCACCTGBN 1e0 0.000e+00 1.0000 248.0 10.40% 7303.0 16.33% GFX(?)/Promoter/Homer ATTCTCGCGAGA 1e0 0.000e+00 1.0000 0.0 0.00% 14.9 0.03% LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer AAGACCCYYN 1e0 0.000e+00 1.0000 165.0 6.92% 5384.6 12.04% OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer ATGAATATTCATGAG 1e0 0.000e+00 1.0000 0.0 0.00% 23.1 0.05% T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer ACTTTCGTTTCT 1e0 0.000e+00 1.0000 0.0 0.00% 30.8 0.07% ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer VCAGGTRDRY 1e0 0.000e+00 1.0000 242.0 10.15% 8464.8 18.92% ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer GNMCAGGTGTGC 1e0 0.000e+00 1.0000 134.0 5.62% 4891.2 10.93% ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer GGGTTTTGAAGGATGARTAGGAGTT 1e0 0.000e+00 1.0000 0.0 0.00% 8.9 0.02%