Motif Name Consensus P-value Log P-value q-value (Benjamini) # of Target Sequences with Motif(of 123) % of Target Sequences with Motif # of Background Sequences with Motif(of 45855) % of Background Sequences with Motif RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer AAACCACARM 1e-37 -8.695e+01 0.0000 73.0 59.35% 5002.8 10.91% Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer NRYTTCCGGH 1e-31 -7.357e+01 0.0000 60.0 48.78% 3705.9 8.08% RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer GCTGTGGTTW 1e-29 -6.882e+01 0.0000 56.0 45.53% 3387.8 7.39% ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer ACCGGAAGTG 1e-29 -6.701e+01 0.0000 56.0 45.53% 3510.8 7.66% ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer ACAGGAAGTG 1e-29 -6.701e+01 0.0000 57.0 46.34% 3673.6 8.01% Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer NNAYTTCCTGHN 1e-28 -6.529e+01 0.0000 54.0 43.90% 3310.4 7.22% Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer MACAGGAAGT 1e-28 -6.452e+01 0.0000 37.0 30.08% 1194.1 2.60% EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer ATTTCCTGTN 1e-27 -6.257e+01 0.0000 50.0 40.65% 2878.5 6.28% RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer NWAACCACADNN 1e-26 -6.041e+01 0.0000 56.0 45.53% 4004.2 8.73% ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer ACAGGAAGTG 1e-25 -5.852e+01 0.0000 66.0 53.66% 6134.3 13.38% RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer SAAACCACAG 1e-25 -5.805e+01 0.0000 51.0 41.46% 3343.4 7.29% ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer AACCGGAAGT 1e-23 -5.470e+01 0.0000 58.0 47.15% 4879.5 10.64% EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer VACAGGAAAT 1e-22 -5.089e+01 0.0000 39.0 31.71% 2037.9 4.44% ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer RCAGGATGTGGT 1e-19 -4.601e+01 0.0000 18.0 14.63% 242.2 0.53% GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer RACCGGAAGT 1e-18 -4.317e+01 0.0000 42.0 34.15% 3026.4 6.60% Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer NRYTTCCGGY 1e-14 -3.400e+01 0.0000 27.0 21.95% 1446.3 3.15% SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer ASWTCCTGBT 1e-14 -3.260e+01 0.0000 40.0 32.52% 3685.6 8.04% Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer HACTTCCGGY 1e-11 -2.737e+01 0.0000 24.0 19.51% 1468.7 3.20% PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer AGAGGAAGTG 1e-11 -2.650e+01 0.0000 26.0 21.14% 1833.4 4.00% EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer AVCAGGAAGT 1e-11 -2.536e+01 0.0000 42.0 34.15% 5065.6 11.05% ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer ANCAGGAAGT 1e-10 -2.366e+01 0.0000 30.0 24.39% 2802.6 6.11% Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer ACTTCCKGKT 1e-10 -2.345e+01 0.0000 34.0 27.64% 3615.2 7.88% ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer ACVAGGAAGT 1e-6 -1.545e+01 0.0000 24.0 19.51% 2692.9 5.87% ETS(ETS)/Promoter/Homer AACCGGAAGT 1e-6 -1.409e+01 0.0000 13.0 10.57% 874.9 1.91% ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer AVCCGGAAGT 1e-6 -1.383e+01 0.0000 16.0 13.01% 1377.6 3.00% Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer CTGTTTAC 1e-5 -1.311e+01 0.0000 47.0 38.21% 9109.2 19.87% Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer SAGATAAGRV 1e-5 -1.171e+01 0.0001 20.0 16.26% 2441.3 5.32% PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer MGGAAGTGAAAC 1e-4 -1.062e+01 0.0004 31.0 25.20% 5344.9 11.66% Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer NBWGATAAGR 1e-4 -1.041e+01 0.0004 27.0 21.95% 4358.5 9.50% GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer VAGRACAKWCTGTYC 1e-4 -1.041e+01 0.0004 11.0 8.94% 888.3 1.94% Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer BBCTTATCTS 1e-4 -1.001e+01 0.0006 20.0 16.26% 2749.3 6.00% Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer CYTGTTTACWYW 1e-4 -9.944e+00 0.0006 25.0 20.33% 3967.5 8.65% KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer DGGGYGKGGC 1e-4 -9.933e+00 0.0006 22.0 17.89% 3234.4 7.05% JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer RATGASTCAT 1e-4 -9.496e+00 0.0009 16.0 13.01% 1959.1 4.27% PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer AAGAACATWHTGTTC 1e-3 -9.127e+00 0.0013 11.0 8.94% 1026.4 2.24% Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer YCTTATCTBN 1e-3 -9.018e+00 0.0014 24.0 19.51% 3946.3 8.61% EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer NWGGGTGTGGCY 1e-3 -8.453e+00 0.0025 8.0 6.50% 592.0 1.29% FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer WAAGTAAACA 1e-3 -7.722e+00 0.0050 30.0 24.39% 5967.7 13.01% Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer CTTTGATGTGSB 1e-3 -7.701e+00 0.0050 12.0 9.76% 1416.3 3.09% AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer VTGACTCATC 1e-3 -7.517e+00 0.0058 18.0 14.63% 2819.7 6.15% Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer NATGASTCABNN 1e-3 -7.512e+00 0.0058 10.0 8.13% 1045.3 2.28% BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer DATGASTCAT 1e-3 -7.430e+00 0.0060 16.0 13.01% 2357.7 5.14% FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer NYYTGTTTACHN 1e-3 -7.375e+00 0.0062 15.0 12.20% 2135.8 4.66% bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer NAGTTTCABTHTGACTNW 1e-3 -7.353e+00 0.0062 14.0 11.38% 1911.1 4.17% Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer DATGASTCATHN 1e-3 -7.084e+00 0.0080 16.0 13.01% 2435.5 5.31% SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer AAAGRGGAAGTG 1e-3 -7.040e+00 0.0082 9.0 7.32% 918.2 2.00% FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer SCHTGTTTACAT 1e-3 -7.033e+00 0.0082 19.0 15.45% 3193.7 6.96% STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer RTTTCTNAGAAA 1e-2 -6.740e+00 0.0105 11.0 8.94% 1366.7 2.98% IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer ACTGAAACCA 1e-2 -6.687e+00 0.0109 14.0 11.38% 2049.7 4.47% FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer NVWTGTTTAC 1e-2 -6.542e+00 0.0123 26.0 21.14% 5249.3 11.45% STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer NYTTCCWGGAAR 1e-2 -6.486e+00 0.0128 22.0 17.89% 4150.4 9.05% Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer GGATGACTCATC 1e-2 -6.406e+00 0.0136 12.0 9.76% 1647.7 3.59% PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer GGAAGTGAAAST 1e-2 -6.358e+00 0.0140 8.0 6.50% 819.6 1.79% ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer RGRACASNSTGTYCYB 1e-2 -6.253e+00 0.0153 8.0 6.50% 833.7 1.82% Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer NNNVCTGWGYAAACASN 1e-2 -6.010e+00 0.0191 24.0 19.51% 4875.6 10.63% RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer CGGTTGCCATGGCAAC 1e-2 -5.990e+00 0.0191 4.0 3.25% 208.5 0.45% PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer RGGTCTCTAACY 1e-2 -5.979e+00 0.0191 9.0 7.32% 1073.4 2.34% Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer DGTAAACA 1e-2 -5.873e+00 0.0208 20.0 16.26% 3805.9 8.30% Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer YGGCCCCGCCCC 1e-2 -5.865e+00 0.0208 18.0 14.63% 3268.2 7.13% Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer GATGASTCATCN 1e-2 -5.812e+00 0.0213 7.0 5.69% 702.6 1.53% Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer GTTGCCATGGCAACM 1e-2 -5.527e+00 0.0279 4.0 3.25% 238.0 0.52% FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer WAAGTAAACA 1e-2 -5.512e+00 0.0279 23.0 18.70% 4778.2 10.42% FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer WWTRTAAACAVG 1e-2 -5.345e+00 0.0324 20.0 16.26% 3988.1 8.70% GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NAGATWNBNATCTNN 1e-2 -5.312e+00 0.0330 4.0 3.25% 252.1 0.55% ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer AGGCCTAG 1e-2 -5.237e+00 0.0350 23.0 18.70% 4887.2 10.66% Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer AGGTGTGAAM 1e-2 -5.183e+00 0.0364 25.0 20.33% 5498.5 11.99% Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer NNATGASTCATH 1e-2 -5.039e+00 0.0414 12.0 9.76% 1955.7 4.27% Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer KGTTGCCATGGCAA 1e-2 -5.032e+00 0.0414 6.0 4.88% 615.3 1.34% LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer CCTTTGATST 1e-2 -4.977e+00 0.0427 16.0 13.01% 3013.2 6.57% FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer TGTTTAYTTAGC 1e-2 -4.888e+00 0.0461 21.0 17.07% 4448.2 9.70% Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer BSNTGTTTACWYWGN 1e-2 -4.845e+00 0.0474 10.0 8.13% 1515.9 3.31% GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer NRGVACABNVTGTYCY 1e-2 -4.777e+00 0.0501 5.0 4.07% 462.7 1.01% GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATAASR 1e-2 -4.722e+00 0.0522 28.0 22.76% 6624.9 14.45% IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer CTTTCANTATGACTV 1e-2 -4.682e+00 0.0535 5.0 4.07% 473.9 1.03% TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer ACWTCAAAGG 1e-1 -4.602e+00 0.0573 4.0 3.25% 310.4 0.68% Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer GCCACACCCA 1e-1 -4.559e+00 0.0590 7.0 5.69% 890.3 1.94% Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer WWATRTAAACAN 1e-1 -4.532e+00 0.0598 20.0 16.26% 4304.4 9.39% NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer KCCACGTGAC 1e-1 -4.317e+00 0.0732 19.0 15.45% 4103.3 8.95% Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer DAGGTGTBAA 1e-1 -4.070e+00 0.0925 22.0 17.89% 5108.0 11.14% X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer GGTTGCCATGGCAA 1e-1 -4.059e+00 0.0925 4.0 3.25% 365.8 0.80% KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer RGKGGGCGKGGC 1e-1 -4.048e+00 0.0925 18.0 14.63% 3925.3 8.56% Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer VGCTGWCAVB 1e-1 -3.993e+00 0.0962 28.0 22.76% 7015.9 15.30% FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer TRTTTACTTW 1e-1 -3.916e+00 0.1027 21.0 17.07% 4880.5 10.64% Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer ASWTCAAAGG 1e-1 -3.844e+00 0.1091 7.0 5.69% 1029.1 2.24% PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer VAGRACAKNCTGTBC 1e-1 -3.750e+00 0.1184 36.0 29.27% 9777.6 21.32% PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer ACTTTCACTTTC 1e-1 -3.600e+00 0.1360 12.0 9.76% 2390.2 5.21% Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer YTGWCADY 1e-1 -3.595e+00 0.1360 49.0 39.84% 14347.3 31.29% KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer MKGGGYGTGGCC 1e-1 -3.556e+00 0.1389 12.0 9.76% 2406.3 5.25% Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer AGGTGTGAAA 1e-1 -3.549e+00 0.1389 21.0 17.07% 5067.6 11.05% Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer TATGCWAATBAV 1e-1 -3.450e+00 0.1509 7.0 5.69% 1119.9 2.44% Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer RGKGGGCGGAGC 1e-1 -3.439e+00 0.1509 10.0 8.13% 1898.8 4.14% Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer GGCCYCCTGCTGDGH 1e-1 -3.431e+00 0.1509 9.0 7.32% 1634.5 3.56% Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer TGCTGAGTCA 1e-1 -3.400e+00 0.1535 5.0 4.07% 661.4 1.44% Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer CACAGCAGGGGG 1e-1 -3.373e+00 0.1562 10.0 8.13% 1920.8 4.19% PSE(SNAPc)/K562-mStart-Seq/Homer WAVTCACCMTAASYDAAAAG 1e-1 -3.351e+00 0.1579 11.0 8.94% 2202.2 4.80% Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer TGCGTGGGYG 1e-1 -3.213e+00 0.1794 9.0 7.32% 1702.3 3.71% WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer MCTCCCMCRCAB 1e-1 -3.205e+00 0.1794 8.0 6.50% 1439.7 3.14% Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer GKVTCADRTTWC 1e-1 -3.143e+00 0.1885 6.0 4.88% 948.4 2.07% MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer GGCVGTTR 1e-1 -3.122e+00 0.1905 30.0 24.39% 8224.0 17.93% Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer GWAAYHTGAKMC 1e-1 -3.115e+00 0.1905 17.0 13.82% 4066.0 8.87% Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer AGGTGTCA 1e-1 -3.110e+00 0.1905 49.0 39.84% 14761.7 32.19% SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer AVCAGCTG 1e-1 -3.089e+00 0.1910 59.0 47.97% 18367.7 40.06% TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer AGATAAGANN 1e-1 -3.044e+00 0.1980 32.0 26.02% 8949.5 19.52% BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer NHAACBGYYV 1e-1 -2.978e+00 0.2094 27.0 21.95% 7335.1 16.00% ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer VCAGGTRDRY 1e-1 -2.935e+00 0.2165 28.0 22.76% 7696.9 16.79% IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer AGTTTCAKTTTC 1e-1 -2.856e+00 0.2321 8.0 6.50% 1548.4 3.38% Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer NAHCAGCTGD 1e-1 -2.768e+00 0.2511 18.0 14.63% 4568.4 9.96% ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer CTGCCWVCTTTTRTA 1e-1 -2.733e+00 0.2578 11.0 8.94% 2447.4 5.34% CRE(bZIP)/Promoter/Homer CSGTGACGTCAC 1e-1 -2.686e+00 0.2675 4.0 3.25% 570.6 1.24% NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer GGGGGAATCCCC 1e-1 -2.670e+00 0.2695 2.0 1.63% 160.1 0.35% NFY(CCAAT)/Promoter/Homer RGCCAATSRG 1e-1 -2.623e+00 0.2800 11.0 8.94% 2496.4 5.44% IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer GRAASTGAAAST 1e-1 -2.555e+00 0.2969 7.0 5.69% 1375.8 3.00% Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer TGTCANYT 1e-1 -2.520e+00 0.3048 49.0 39.84% 15329.5 33.43% IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer GAAAGTGAAAGT 1e-1 -2.444e+00 0.3259 4.0 3.25% 621.4 1.36% Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer CTTCCGGGAA 1e-1 -2.434e+00 0.3263 8.0 6.50% 1700.7 3.71% Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer VCAGCTGYTG 1e-1 -2.407e+00 0.3323 14.0 11.38% 3522.2 7.68% KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer NRGCCCCRCCCHBNN 1e-1 -2.386e+00 0.3365 5.0 4.07% 889.5 1.94% Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer SVYTTCCNGGAARB 1e0 -2.287e+00 0.3683 11.0 8.94% 2658.4 5.80% Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer HNRAATCAAT 1e0 -2.275e+00 0.3696 7.0 5.69% 1475.6 3.22% THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer GGTCANYTGAGGWCA 1e0 -2.273e+00 0.3696 6.0 4.88% 1194.5 2.60% E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer DNRCAGCTGY 1e0 -2.265e+00 0.3696 21.0 17.07% 5878.7 12.82% NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer WNTGTTTRYTTTGGCA 1e0 -2.258e+00 0.3696 2.0 1.63% 204.5 0.45% Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer GCCACRCCCACY 1e0 -2.249e+00 0.3696 4.0 3.25% 667.1 1.45% MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer GCTGASTCAGCA 1e0 -2.233e+00 0.3702 4.0 3.25% 671.6 1.46% Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer WATGCAAATGAG 1e0 -2.195e+00 0.3813 7.0 5.69% 1506.5 3.29% CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer TGCAGTTCCMVNWRTGGCCA 1e0 -2.195e+00 0.3813 1.0 0.81% 44.7 0.10% Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer RGCAATNAAA 1e0 -2.194e+00 0.3813 40.0 32.52% 12471.4 27.20% STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer NATTTCCNGGAAAT 1e0 -2.178e+00 0.3813 6.0 4.88% 1228.0 2.68% AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer TGGCAGTTGG 1e0 -2.150e+00 0.3864 25.0 20.33% 7313.7 15.95% GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer CRGCTGBNGNSNNSAGATAA 1e0 -2.115e+00 0.3971 3.0 2.44% 449.7 0.98% IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer GAAASYGAAASY 1e0 -2.101e+00 0.3998 3.0 2.44% 452.6 0.99% PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer GSCTGTCACTCA 1e0 -2.076e+00 0.4066 2.0 1.63% 228.5 0.50% OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAACAATG 1e0 -2.064e+00 0.4084 4.0 3.25% 715.1 1.56% Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer CTGTCTGG 1e0 -2.043e+00 0.4142 19.0 15.45% 5386.2 11.75% n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer VRCCACGTGG 1e0 -2.013e+00 0.4234 9.0 7.32% 2186.0 4.77% Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer HAWGRGGCCM 1e0 -2.007e+00 0.4234 29.0 23.58% 8816.2 19.23% OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer ATGAATWATTCATGA 1e0 -2.003e+00 0.4234 1.0 0.81% 54.0 0.12% Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer AAGGTGTKAA 1e0 -1.950e+00 0.4415 24.0 19.51% 7152.9 15.60% c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer VVCCACGTGG 1e0 -1.928e+00 0.4476 7.0 5.69% 1618.7 3.53% Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer CCATTGTTNY 1e0 -1.926e+00 0.4476 25.0 20.33% 7516.5 16.39% Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer AAACMATTAN 1e0 -1.911e+00 0.4488 9.0 7.32% 2238.3 4.88% KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer GGGGGTGTGTCC 1e0 -1.876e+00 0.4618 8.0 6.50% 1947.6 4.25% Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer TTRAGTGSYK 1e0 -1.857e+00 0.4672 30.0 24.39% 9317.5 20.32% Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer SCTGTCAVTCAV 1e0 -1.849e+00 0.4678 4.0 3.25% 778.9 1.70% ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer AGTTTCASTTTC 1e0 -1.849e+00 0.4678 2.0 1.63% 263.3 0.57% Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer TAAYCYAATCAA 1e0 -1.837e+00 0.4678 2.0 1.63% 265.1 0.58% BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer GNCACGTG 1e0 -1.827e+00 0.4685 25.0 20.33% 7612.1 16.60% AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer CCAGGAACAG 1e0 -1.826e+00 0.4685 49.0 39.84% 16127.2 35.17% Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer TWGTCTGV 1e0 -1.812e+00 0.4690 35.0 28.46% 11125.0 24.26% Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer NAACAGCTGG 1e0 -1.812e+00 0.4690 13.0 10.57% 3578.7 7.80% MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer RTCATGTGAC 1e0 -1.783e+00 0.4767 12.0 9.76% 3272.3 7.14% MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer DGCACACGTG 1e0 -1.768e+00 0.4804 15.0 12.20% 4270.8 9.31% GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NNNNNBAGATAWYATCTVHN 1e0 -1.766e+00 0.4804 3.0 2.44% 530.1 1.16% HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer VCAGCTGBNN 1e0 -1.743e+00 0.4862 25.0 20.33% 7696.2 16.78% HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer GTTAATNATTAA 1e0 -1.729e+00 0.4902 3.0 2.44% 540.5 1.18% ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer GTCWGCTGTYYCTCT 1e0 -1.709e+00 0.4969 2.0 1.63% 288.2 0.63% Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer SSRGCAGCTGCH 1e0 -1.706e+00 0.4969 15.0 12.20% 4319.6 9.42% Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer BAACAGCTGT 1e0 -1.697e+00 0.4969 10.0 8.13% 2680.3 5.85% Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer NANTGCSGCA 1e0 -1.624e+00 0.5303 3.0 2.44% 569.8 1.24% Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer ATTAACACCT 1e0 -1.617e+00 0.5310 34.0 27.64% 11003.0 24.00% Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer GGTGYTGACAGS 1e0 -1.614e+00 0.5310 4.0 3.25% 857.1 1.87% Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer ACAGCTGTTN 1e0 -1.589e+00 0.5394 34.0 27.64% 11038.6 24.07% Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer ATATGCAAAT 1e0 -1.559e+00 0.5523 5.0 4.07% 1178.8 2.57% Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer SNGCACCTGCHS 1e0 -1.537e+00 0.5610 8.0 6.50% 2134.0 4.65% Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer NGCGTGGGCGGR 1e0 -1.528e+00 0.5630 2.0 1.63% 325.7 0.71% Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer GGCMATGAAA 1e0 -1.525e+00 0.5630 17.0 13.82% 5153.9 11.24% Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer ANTTMRCASBNNNGTGYKAAN 1e0 -1.515e+00 0.5636 5.0 4.07% 1199.0 2.61% CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer GHCACGTG 1e0 -1.510e+00 0.5636 7.0 5.69% 1829.2 3.99% c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer ATGACGTCATCY 1e0 -1.506e+00 0.5636 4.0 3.25% 898.1 1.96% HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer NTATYGATCH 1e0 -1.477e+00 0.5750 7.0 5.69% 1848.7 4.03% GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer CGTGGGTGGTCC 1e0 -1.475e+00 0.5750 2.0 1.63% 337.3 0.74% GFY-Staf(?,Zf)/Promoter/Homer RACTACAATTCCCAGAAKGC 1e0 -1.455e+00 0.5809 1.0 0.81% 99.1 0.22% Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer CCATTGTATGCAAAT 1e0 -1.397e+00 0.6120 3.0 2.44% 641.9 1.40% Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer GGGGGGGG 1e0 -1.376e+00 0.6214 9.0 7.32% 2569.3 5.60% Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer NRRTGACGTCAT 1e0 -1.354e+00 0.6314 4.0 3.25% 961.1 2.10% ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer GNMCAGGTGTGC 1e0 -1.354e+00 0.6314 13.0 10.57% 3940.3 8.59% Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer GTCACGTGGT 1e0 -1.332e+00 0.6385 4.0 3.25% 971.5 2.12% Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer GATTTGCATA 1e0 -1.328e+00 0.6385 5.0 4.07% 1289.9 2.81% Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAW 1e0 -1.326e+00 0.6385 7.0 5.69% 1940.0 4.23% Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer ATGCATAATTCA 1e0 -1.316e+00 0.6385 5.0 4.07% 1295.4 2.82% E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer BTKGGCGGGAAA 1e0 -1.303e+00 0.6426 4.0 3.25% 984.1 2.15% NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer NVCACGTG 1e0 -1.282e+00 0.6525 21.0 17.07% 6804.7 14.84% Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer HTGCTGAGTCAT 1e0 -1.261e+00 0.6625 1.0 0.81% 124.1 0.27% MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer AACAGCTG 1e0 -1.251e+00 0.6655 13.0 10.57% 4035.6 8.80% Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer BTBRAGTGSN 1e0 -1.228e+00 0.6779 24.0 19.51% 7938.5 17.31% Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer NNVVCAGCTGBN 1e0 -1.226e+00 0.6779 18.0 14.63% 5811.0 12.67% Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer AAGCACTTAA 1e0 -1.224e+00 0.6779 32.0 26.02% 10816.1 23.59% NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer VTTACGTAAYNNNNN 1e0 -1.222e+00 0.6779 9.0 7.32% 2686.2 5.86% E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer NVCACCTGBN 1e0 -1.219e+00 0.6779 19.0 15.45% 6172.8 13.46% Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer GTRGGTCASTGGGTCA 1e0 -1.217e+00 0.6779 2.0 1.63% 405.4 0.88% GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer CTCCCTGGGAGGCCN 1e0 -1.213e+00 0.6779 12.0 9.76% 3725.5 8.12% Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer GATGACGTCA 1e0 -1.212e+00 0.6779 8.0 6.50% 2354.2 5.13% ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer GGAACAGCCG 1e0 -1.197e+00 0.6779 8.0 6.50% 2365.0 5.16% Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer GCTATTTTTAGC 1e0 -1.186e+00 0.6779 3.0 2.44% 721.8 1.57% Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer MAATCACTGC 1e0 -1.186e+00 0.6779 9.0 7.32% 2715.4 5.92% MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer RRCAGCTGYTSY 1e0 -1.163e+00 0.6823 9.0 7.32% 2734.4 5.96% ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer AGGCCTRG 1e0 -1.161e+00 0.6823 12.0 9.76% 3775.5 8.23% TATA-Box(TBP)/Promoter/Homer CCTTTTAWAGSC 1e0 -1.160e+00 0.6823 18.0 14.63% 5888.2 12.84% Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer GCTATTTTTGGM 1e0 -1.158e+00 0.6823 11.0 8.94% 3430.9 7.48% NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer AWWWTGCTGAGTCAT 1e0 -1.148e+00 0.6823 1.0 0.81% 142.3 0.31% Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer VBSYGTCTGG 1e0 -1.141e+00 0.6823 17.0 13.82% 5556.5 12.12% DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer NWTAAYCYAATCAWN 1e0 -1.126e+00 0.6875 1.0 0.81% 146.9 0.32% Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer TAATTAGN 1e0 -1.110e+00 0.6949 14.0 11.38% 4531.0 9.88% Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer TGTTKCCTAGCAACM 1e0 -1.107e+00 0.6949 12.0 9.76% 3829.5 8.35% STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer TTCCKNAGAA 1e0 -1.081e+00 0.7082 8.0 6.50% 2458.3 5.36% BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer NAMCAGCTGK 1e0 -1.076e+00 0.7082 16.0 13.01% 5278.4 11.51% Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer AWWNTGCTGAGTCAT 1e0 -1.072e+00 0.7082 1.0 0.81% 156.5 0.34% LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer RGGTTACTANAGGTCA 1e0 -1.067e+00 0.7082 1.0 0.81% 157.2 0.34% MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer WNTGCTGASTCAGCANWTTY 1e0 -1.061e+00 0.7086 5.0 4.07% 1444.9 3.15% PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer RTGATTKATRGN 1e0 -1.056e+00 0.7091 10.0 8.13% 3178.3 6.93% Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer DCYAAAAATAGM 1e0 -1.054e+00 0.7091 6.0 4.88% 1790.3 3.90% Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer SCTGTCAMTCAN 1e0 -1.052e+00 0.7091 3.0 2.44% 781.7 1.70% Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer RSCACTYRAG 1e0 -1.044e+00 0.7091 35.0 28.46% 12193.5 26.59% Sp1(Zf)/Promoter/Homer GGCCCCGCCCCC 1e0 -1.032e+00 0.7128 1.0 0.81% 164.3 0.36% Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer VCAKCTGGNNNCCAGMTGBN 1e0 -1.028e+00 0.7128 2.0 1.63% 468.9 1.02% Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer NGRTGACGTCAY 1e0 -1.024e+00 0.7128 5.0 4.07% 1469.4 3.20% CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer CCATATATGGNM 1e0 -1.022e+00 0.7128 4.0 3.25% 1130.4 2.47% NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer GATGACTCAGCA 1e0 -1.017e+00 0.7128 1.0 0.81% 167.3 0.36% NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer GGAAATTCCC 1e0 -1.013e+00 0.7128 1.0 0.81% 168.1 0.37% Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer CCTGCTGAGH 1e0 -1.003e+00 0.7134 9.0 7.32% 2877.1 6.27% GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer RGGATTAR 1e0 -9.846e-01 0.7235 13.0 10.57% 4317.9 9.42% LXH9(Homeobox)/Hct116-LXH9.V5-ChIP-Seq(GSE116822)/Homer NGCTAATTAG 1e0 -9.828e-01 0.7235 18.0 14.63% 6115.5 13.34% Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer RAACAATGGN 1e0 -9.568e-01 0.7373 14.0 11.38% 4709.1 10.27% HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer GCACGTACCC 1e0 -9.303e-01 0.7537 4.0 3.25% 1187.5 2.59% ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer ARGAGGMCAAAATGW 1e0 -9.290e-01 0.7537 2.0 1.63% 507.5 1.11% EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer GTCCCCWGGGGA 1e0 -9.273e-01 0.7537 9.0 7.32% 2952.9 6.44% OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer ATGCATWATGCATRW 1e0 -9.089e-01 0.7598 9.0 7.32% 2971.2 6.48% Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer TTTTATGGCM 1e0 -9.050e-01 0.7598 32.0 26.02% 11342.5 24.74% NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer WGGGGATTTCCC 1e0 -9.023e-01 0.7598 5.0 4.07% 1556.3 3.39% E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer GGCGGGAARN 1e0 -9.001e-01 0.7598 3.0 2.44% 860.0 1.88% Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer GGYAATGAAA 1e0 -8.845e-01 0.7651 8.0 6.50% 2638.4 5.75% Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer ATTGCATCAT 1e0 -8.809e-01 0.7651 3.0 2.44% 871.6 1.90% Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer TYTGACCASWRG 1e0 -8.746e-01 0.7661 8.0 6.50% 2648.9 5.78% ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer RGGGCACTAACY 1e0 -8.743e-01 0.7661 7.0 5.69% 2290.4 4.99% HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer RTACGTGC 1e0 -8.493e-01 0.7790 11.0 8.94% 3759.9 8.20% TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer SMCATCTGKH 1e0 -8.442e-01 0.7797 17.0 13.82% 5951.4 12.98% Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer NNNCTTTCCAGGAAA 1e0 -8.298e-01 0.7876 16.0 13.01% 5607.4 12.23% CHR(?)/Hela-CellCycle-Expression/Homer SRGTTTCAAA 1e0 -8.145e-01 0.7964 9.0 7.32% 3074.8 6.71% Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer CCWTTGTY 1e0 -7.870e-01 0.8152 23.0 18.70% 8249.6 17.99% JunD(bZIP)/K562-JunD-ChIP-Seq/Homer ATGACGTCATCN 1e0 -7.553e-01 0.8380 1.0 0.81% 236.6 0.52% Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer CCATTGTTYB 1e0 -7.546e-01 0.8380 9.0 7.32% 3145.1 6.86% Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer GGTTAAWCATTAA 1e0 -7.425e-01 0.8417 2.0 1.63% 596.1 1.30% CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer AYAGTGCCMYCTRGTGGCCA 1e0 -6.764e-01 0.8955 1.0 0.81% 264.3 0.58% FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer AGTAAACAAAAAAGAACAND 1e0 -6.712e-01 0.8965 1.0 0.81% 266.9 0.58% GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATGKDGAGATAAG 1e0 -6.585e-01 0.9043 1.0 0.81% 272.0 0.59% PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GCAGCCAAGCRTGACH 1e0 -6.581e-01 0.9043 3.0 2.44% 1021.7 2.23% Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer NTAATBNAATTA 1e0 -6.544e-01 0.9043 7.0 5.69% 2526.1 5.51% Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer YCTTTGTTCC 1e0 -6.306e-01 0.9186 10.0 8.13% 3685.2 8.04% Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer ACTYKNATTCGTGNTACTTC 1e0 -6.152e-01 0.9291 1.0 0.81% 289.5 0.63% PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GTCACGCTCSCTGM 1e0 -6.129e-01 0.9291 1.0 0.81% 290.1 0.63% NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer SARTGGAAAAWRTGAGTCAB 1e0 -6.079e-01 0.9291 2.0 1.63% 678.8 1.48% Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer CCCCTCCCCCAC 1e0 -5.928e-01 0.9351 1.0 0.81% 299.5 0.65% ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer GTGGGCCCCA 1e0 -5.928e-01 0.9351 1.0 0.81% 299.3 0.65% NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer ATTTTCCATT 1e0 -5.897e-01 0.9351 11.0 8.94% 4127.7 9.00% Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer AGGVNCCTTTGT 1e0 -5.862e-01 0.9351 10.0 8.13% 3754.3 8.19% ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer TTAACCCTTTVNKKN 1e0 -5.783e-01 0.9376 3.0 2.44% 1088.9 2.37% GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer AAACYKGTTWDACMRGTTTB 1e0 -5.572e-01 0.9540 4.0 3.25% 1497.5 3.27% RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer WAABTAGGTCAV 1e0 -5.552e-01 0.9540 1.0 0.81% 317.6 0.69% CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer ATTGCGCAAC 1e0 -5.502e-01 0.9540 8.0 6.50% 3048.7 6.65% Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer TTAATTNAATTA 1e0 -5.484e-01 0.9540 2.0 1.63% 722.0 1.57% ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer GAGSCCGAGC 1e0 -5.394e-01 0.9562 1.0 0.81% 325.0 0.71% HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer GYCATCMATCAT 1e0 -5.356e-01 0.9562 1.0 0.81% 327.6 0.71% THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer GGTCACCTGAGGTCA 1e0 -5.318e-01 0.9562 4.0 3.25% 1525.9 3.33% Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer CCWTTGTYYB 1e0 -5.264e-01 0.9577 20.0 16.26% 7664.0 16.71% Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer MCAGCTGBYH 1e0 -5.241e-01 0.9577 18.0 14.63% 6910.8 15.07% Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCAATTA 1e0 -5.187e-01 0.9578 1.0 0.81% 336.7 0.73% Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer BTCAAGGTCA 1e0 -4.972e-01 0.9750 6.0 4.88% 2353.2 5.13% Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer MTGATGCAAT 1e0 -4.930e-01 0.9755 3.0 2.44% 1171.4 2.55% Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer VNRVCAGCTGGY 1e0 -4.921e-01 0.9755 10.0 8.13% 3916.0 8.54% Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer RCCACGTGGYYN 1e0 -4.917e-01 0.9755 6.0 4.88% 2361.3 5.15% Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer CTGGCAGSCTGCCA 1e0 -4.864e-01 0.9755 3.0 2.44% 1178.3 2.57% Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer SCCTAGCAACAG 1e0 -4.762e-01 0.9774 3.0 2.44% 1189.0 2.59% Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer GGGGCTYGKCTGGGA 1e0 -4.703e-01 0.9795 1.0 0.81% 364.9 0.80% HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer TTCTAGAABNTTCTA 1e0 -4.689e-01 0.9795 2.0 1.63% 787.6 1.72% p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer NNDRCATGYCYNRRCATGYH 1e0 -4.600e-01 0.9825 3.0 2.44% 1207.7 2.63% Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer YSTGGGTGGTCT 1e0 -4.432e-01 0.9955 2.0 1.63% 811.0 1.77% CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer DRTGTTGCAA 1e0 -4.416e-01 0.9955 9.0 7.32% 3624.0 7.90% Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer BTCAAGGTCA 1e0 -4.395e-01 0.9955 4.0 3.25% 1640.0 3.58% ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer AGGAARCAGCTG 1e0 -4.318e-01 0.9961 1.0 0.81% 389.7 0.85% Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer NRAACCRGTTYRAACCRGYT 1e0 -4.289e-01 0.9961 1.0 0.81% 391.2 0.85% HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer TTTTATKRGG 1e0 -4.271e-01 0.9961 12.0 9.76% 4826.4 10.53% Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer CYAAAAATAG 1e0 -4.179e-01 0.9993 4.0 3.25% 1669.3 3.64% Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer TBGCACGCAA 1e0 -4.082e-01 1.0000 5.0 4.07% 2091.8 4.56% Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer CYHATAAAAN 1e0 -4.013e-01 1.0000 32.0 26.02% 12575.7 27.42% OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer YATGCATATRCATRT 1e0 -3.880e-01 1.0000 1.0 0.81% 421.7 0.92% Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer HDGYAATGAAAN 1e0 -3.863e-01 1.0000 22.0 17.89% 8805.0 19.20% RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer AAYTAGGTCA 1e0 -3.854e-01 1.0000 1.0 0.81% 423.2 0.92% RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer AAYTAGGTCA 1e0 -3.854e-01 1.0000 1.0 0.81% 423.2 0.92% Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer TGACANARRCCAGRC 1e0 -3.834e-01 1.0000 4.0 3.25% 1720.6 3.75% bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer KCACGTGMCN 1e0 -3.825e-01 1.0000 2.0 1.63% 874.5 1.91% Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer RGCCATTAAC 1e0 -3.772e-01 1.0000 46.0 37.40% 17950.2 39.15% RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer AAWCTAGGTCARDNN 1e0 -3.717e-01 1.0000 1.0 0.81% 434.4 0.95% CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer NGYCATAAAWCH 1e0 -3.715e-01 1.0000 9.0 7.32% 3770.1 8.22% Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer ATGMATATDC 1e0 -3.703e-01 1.0000 10.0 8.13% 4171.6 9.10% NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer ACCATCTGTT 1e0 -3.700e-01 1.0000 15.0 12.20% 6141.4 13.39% HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer RTTATGYAAB 1e0 -3.580e-01 1.0000 9.0 7.32% 3801.5 8.29% Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer BCCATTGTTC 1e0 -3.404e-01 1.0000 9.0 7.32% 3843.5 8.38% HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer BSTTCTRGAABVTTCYAGAA 1e0 -3.361e-01 1.0000 1.0 0.81% 465.1 1.01% NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer YTGCCAAG 1e0 -3.278e-01 1.0000 17.0 13.82% 7051.4 15.38% AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer SCCTSAGGSCAW 1e0 -3.165e-01 1.0000 6.0 4.88% 2674.9 5.83% ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer NGNTCTAGAACCNGV 1e0 -3.116e-01 1.0000 3.0 2.44% 1409.7 3.07% ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer AACATCTGGA 1e0 -3.100e-01 1.0000 4.0 3.25% 1845.4 4.02% Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer CVGTSCTCCC 1e0 -3.025e-01 1.0000 12.0 9.76% 5151.9 11.24% SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer CAAGGHCANV 1e0 -2.889e-01 1.0000 3.0 2.44% 1448.8 3.16% CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer TATCGATNAN 1e0 -2.879e-01 1.0000 5.0 4.07% 2317.5 5.05% EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer DGTCCCYRGGGA 1e0 -2.876e-01 1.0000 1.0 0.81% 514.3 1.12% Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer GGCCATAAATCA 1e0 -2.720e-01 1.0000 4.0 3.25% 1921.1 4.19% Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer NNTGTGGATTSS 1e0 -2.690e-01 1.0000 6.0 4.88% 2786.9 6.08% Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer GKTAATGR 1e0 -2.619e-01 1.0000 29.0 23.58% 11978.5 26.12% Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer NYTAATCCYB 1e0 -2.612e-01 1.0000 6.0 4.88% 2806.8 6.12% NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer CYTGGCABNSTGCCAR 1e0 -2.569e-01 1.0000 2.0 1.63% 1046.2 2.28% DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer TWGHWACAWTGTWDC 1e0 -2.442e-01 1.0000 2.0 1.63% 1068.7 2.33% MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer TGCTGACTCA 1e0 -2.413e-01 1.0000 6.0 4.88% 2861.0 6.24% ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer TGGGGAAGGGCM 1e0 -2.401e-01 1.0000 4.0 3.25% 1993.7 4.35% RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer GGGRAARRGRMCAGMTG 1e0 -2.392e-01 1.0000 2.0 1.63% 1077.1 2.35% STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer ABTTCYYRRGAA 1e0 -2.318e-01 1.0000 5.0 4.07% 2454.8 5.35% Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer HTTTCCCASG 1e0 -2.278e-01 1.0000 13.0 10.57% 5813.8 12.68% CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer NTNATGCAAYMNNHTGMAAY 1e0 -2.246e-01 1.0000 1.0 0.81% 594.0 1.30% PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer ADGGYAGYAGCATCT 1e0 -2.186e-01 1.0000 3.0 2.44% 1591.6 3.47% Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer RRSCACTYAA 1e0 -2.127e-01 1.0000 22.0 17.89% 9484.6 20.68% ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer TGGAACAGMA 1e0 -1.990e-01 1.0000 6.0 4.88% 2989.7 6.52% Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer AGGTGHCAGACA 1e0 -1.936e-01 1.0000 1.0 0.81% 643.9 1.40% CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer GCTAATCC 1e0 -1.864e-01 1.0000 21.0 17.07% 9226.0 20.12% Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer VGCCATAAAA 1e0 -1.836e-01 1.0000 27.0 21.95% 11613.4 25.33% E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer GGCGGGAAAH 1e0 -1.755e-01 1.0000 1.0 0.81% 676.6 1.48% FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer AGGTCANTGACCTB 1e0 -1.675e-01 1.0000 2.0 1.63% 1232.5 2.69% c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer VCCACGTG 1e0 -1.664e-01 1.0000 2.0 1.63% 1235.8 2.70% Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer TGATTRATGGCY 1e0 -1.649e-01 1.0000 1.0 0.81% 697.8 1.52% Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer RTCACSCCAY 1e0 -1.568e-01 1.0000 1.0 0.81% 715.0 1.56% HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer TACGTGCV 1e0 -1.540e-01 1.0000 1.0 0.81% 720.9 1.57% PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer ACCRTGACTAATTNN 1e0 -1.513e-01 1.0000 1.0 0.81% 726.2 1.58% COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer GKBCARAGGTCA 1e0 -1.492e-01 1.0000 10.0 8.13% 4920.4 10.73% ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer GRTGMTRGAGCC 1e0 -1.476e-01 1.0000 2.0 1.63% 1287.0 2.81% Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer TGACCTTTNCNT 1e0 -1.448e-01 1.0000 1.0 0.81% 741.7 1.62% Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer ADBTAATTAR 1e0 -1.398e-01 1.0000 16.0 13.01% 7483.9 16.32% USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer SGTCACGTGR 1e0 -1.390e-01 1.0000 2.0 1.63% 1314.0 2.87% ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer GAGCCTGGTACTGWGCCTGR 1e0 -1.334e-01 1.0000 1.0 0.81% 769.6 1.68% Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer NDGTAATTAC 1e0 -1.291e-01 1.0000 5.0 4.07% 2812.0 6.13% Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer RCCATMTGTT 1e0 -1.234e-01 1.0000 17.0 13.82% 8007.8 17.46% NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer GCCATCTGTT 1e0 -1.141e-01 1.0000 5.0 4.07% 2885.2 6.29% Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer YTAATTRAWWCCAGATGT 1e0 -1.095e-01 1.0000 1.0 0.81% 837.1 1.83% AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer ATGCCCTGAGGC 1e0 -1.085e-01 1.0000 3.0 2.44% 1943.1 4.24% Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer GTCATGCHTGRCTGS 1e0 -1.061e-01 1.0000 1.0 0.81% 848.4 1.85% HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer TGATKGATGR 1e0 -9.594e-02 1.0000 1.0 0.81% 883.1 1.93% PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer YCCDNTCCAGGTTTT 1e0 -9.338e-02 1.0000 7.0 5.69% 3933.4 8.58% Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer YTAATYNRATTA 1e0 -9.258e-02 1.0000 2.0 1.63% 1489.8 3.25% Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer TATTGAYY 1e0 -8.945e-02 1.0000 6.0 4.88% 3499.4 7.63% Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer TAATCCCN 1e0 -8.347e-02 1.0000 42.0 34.15% 18301.6 39.91% Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer NNYTAATTAR 1e0 -8.317e-02 1.0000 9.0 7.32% 4913.3 10.71% PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer TGGTACATTCCA 1e0 -7.560e-02 1.0000 3.0 2.44% 2120.4 4.62% Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer CTAATKGV 1e0 -6.573e-02 1.0000 17.0 13.82% 8550.6 18.65% MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer HWWGTCAGCAWWTTT 1e0 -5.525e-02 1.0000 1.0 0.81% 1077.9 2.35% PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer VNAGGKCAAAGGTCA 1e0 -5.510e-02 1.0000 6.0 4.88% 3790.2 8.27% EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer NABTCCCWDGGGAVH 1e0 -5.101e-02 1.0000 4.0 3.25% 2838.4 6.19% Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer KTGACCTTGA 1e0 -5.038e-02 1.0000 3.0 2.44% 2315.8 5.05% ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer WDNCTGGGCA 1e0 -4.761e-02 1.0000 7.0 5.69% 4356.3 9.50% THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer TRAGGTCA 1e0 -3.261e-02 1.0000 32.0 26.02% 15294.1 33.35% LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer AAGACCCYYN 1e0 -3.206e-02 1.0000 5.0 4.07% 3597.9 7.85% SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer GCAACAGGTG 1e0 -3.122e-02 1.0000 1.0 0.81% 1280.3 2.79% Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer YCATYAATCA 1e0 -2.696e-02 1.0000 5.0 4.07% 3689.8 8.05% HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer TGCCAGCB 1e0 -2.642e-02 1.0000 13.0 10.57% 7501.0 16.36% bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer KCACGTGMCN 1e0 -2.425e-02 1.0000 4.0 3.25% 3214.5 7.01% RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer TTGAMCTTTG 1e0 -2.302e-02 1.0000 22.0 17.89% 11495.6 25.07% PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer TGACCTTTGCCCCA 1e0 -2.121e-02 1.0000 4.0 3.25% 3280.7 7.15% Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer GYMATAAAAH 1e0 -1.842e-02 1.0000 3.0 2.44% 2782.7 6.07% EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer NRBCARRGGTCA 1e0 -1.614e-02 1.0000 6.0 4.88% 4478.2 9.77% HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer CARRGKBCAAAGTYCA 1e0 -1.349e-02 1.0000 1.0 0.81% 1580.8 3.45% Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer NCYAATAAAA 1e0 -1.286e-02 1.0000 12.0 9.76% 7519.4 16.40% Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer CAAAGGTCAG 1e0 -1.080e-02 1.0000 12.0 9.76% 7628.3 16.64% RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer TAGGGCAAAGGTCA 1e0 -7.748e-03 1.0000 4.0 3.25% 3761.9 8.20% TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer CCWGGAATGY 1e0 -5.292e-03 1.0000 1.0 0.81% 1914.2 4.17% ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer GTGACCTTGRVN 1e0 -3.039e-03 1.0000 2.0 1.63% 2897.3 6.32% COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer AGRGGTCA 1e0 -2.968e-03 1.0000 7.0 5.69% 5879.5 12.82% TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer CCWGGAATGY 1e0 -1.900e-03 1.0000 2.0 1.63% 3081.0 6.72% TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer TRCATTCCAG 1e0 -1.152e-03 1.0000 4.0 3.25% 4614.3 10.06% Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer SSCMATWAAA 1e0 -5.460e-04 1.0000 1.0 0.81% 2717.3 5.93% TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer CYRCATTCCA 1e0 -3.780e-04 1.0000 2.0 1.63% 3700.5 8.07% BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer CNNBRGCGCCCCCTGSTGGC 1e0 0.000e+00 1.0000 0.0 0.00% 319.2 0.70% Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer ATGAATATTC 1e0 0.000e+00 1.0000 0.0 0.00% 332.7 0.73% DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer YDGHTACAWTGTADC 1e0 0.000e+00 1.0000 0.0 0.00% 874.9 1.91% RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer AGGTCAAGGTCA 1e0 0.000e+00 1.0000 0.0 0.00% 389.2 0.85% RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer RGGTCADNNAGAGGTCAV 1e0 0.000e+00 1.0000 0.0 0.00% 80.8 0.18% DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer BCWGATTCAATCAAN 1e0 0.000e+00 1.0000 0.0 0.00% 11.5 0.02% E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer CWGGCGGGAA 1e0 0.000e+00 1.0000 0.0 0.00% 266.4 0.58% E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer VDTTTCCCGCCA 1e0 0.000e+00 1.0000 0.0 0.00% 126.7 0.28% E2F(E2F)/Hela-CellCycle-Expression/Homer TTSGCGCGAAAA 1e0 0.000e+00 1.0000 0.0 0.00% 88.2 0.19% EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer GGYAGCAYDTGCTDCCCNNN 1e0 0.000e+00 1.0000 0.0 0.00% 44.5 0.10% E-box(bHLH)/Promoter/Homer SSGGTCACGTGA 1e0 0.000e+00 1.0000 0.0 0.00% 148.3 0.32% ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer VAGGTCACNSTGACC 1e0 0.000e+00 1.0000 0.0 0.00% 799.1 1.74% GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATSTNDNNDSAGATAASN 1e0 0.000e+00 1.0000 0.0 0.00% 227.1 0.50% GFX(?)/Promoter/Homer ATTCTCGCGAGA 1e0 0.000e+00 1.0000 0.0 0.00% 12.9 0.03% GFY(?)/Promoter/Homer ACTACAATTCCC 1e0 0.000e+00 1.0000 0.0 0.00% 176.2 0.38% HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer TWVGGTCCGC 1e0 0.000e+00 1.0000 0.0 0.00% 298.3 0.65% MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer TTCAAAWTAAAAGTC 1e0 0.000e+00 1.0000 0.0 0.00% 1134.8 2.47% NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer CTGCGCATGCGC 1e0 0.000e+00 1.0000 0.0 0.00% 98.6 0.22% NRF(NRF)/Promoter/Homer STGCGCATGCGC 1e0 0.000e+00 1.0000 0.0 0.00% 271.0 0.59% OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer ATGAATATTCATGAG 1e0 0.000e+00 1.0000 0.0 0.00% 17.0 0.04% p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer RRCATGYCYRGRCATGYYYN 1e0 0.000e+00 1.0000 0.0 0.00% 323.1 0.70% p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer ACATGCCCGGGCAT 1e0 0.000e+00 1.0000 0.0 0.00% 35.8 0.08% p53(p53)/Saos-p53-ChIP-Seq/Homer RRCATGYCYRGRCATGYYYN 1e0 0.000e+00 1.0000 0.0 0.00% 323.1 0.70% p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer NRRRCAWGTCCDGRCATGYY 1e0 0.000e+00 1.0000 0.0 0.00% 134.2 0.29% PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer NGTGTTCAVTSAAGCGKAAA 1e0 0.000e+00 1.0000 0.0 0.00% 283.1 0.62% Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer NTAATTDGCYAATTANNWWD 1e0 0.000e+00 1.0000 0.0 0.00% 66.4 0.14% Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCHGATTAC 1e0 0.000e+00 1.0000 0.0 0.00% 70.1 0.15% RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer AGGTCAAGGTCA 1e0 0.000e+00 1.0000 0.0 0.00% 76.9 0.17% REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer GGMGCTGTCCATGGTGCTGA 1e0 0.000e+00 1.0000 0.0 0.00% 20.0 0.04% Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer RACTACAACTCCCAGVAKGC 1e0 0.000e+00 1.0000 0.0 0.00% 39.3 0.09% Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer TGWAAYCTGABACCB 1e0 0.000e+00 1.0000 0.0 0.00% 192.1 0.42% Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer CGGTCACSCCAC 1e0 0.000e+00 1.0000 0.0 0.00% 403.4 0.88% ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer ATTTCCCAGVAKSCY 1e0 0.000e+00 1.0000 0.0 0.00% 825.7 1.80% T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer ACTTTCGTTTCT 1e0 0.000e+00 1.0000 0.0 0.00% 50.5 0.11% TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer YCWGGAATGY 1e0 0.000e+00 1.0000 0.0 0.00% 2594.7 5.66% TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer GTCACGTGACYV 1e0 0.000e+00 1.0000 0.0 0.00% 196.9 0.43% TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer GAGGTCAAAGGTCA 1e0 0.000e+00 1.0000 0.0 0.00% 303.6 0.66% VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer ARAGGTCANWGAGTTCANNN 1e0 0.000e+00 1.0000 0.0 0.00% 714.2 1.56% YY1(Zf)/Promoter/Homer CAAGATGGCGGC 1e0 0.000e+00 1.0000 0.0 0.00% 166.7 0.36% ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer GGVTCTCGCGAGAAC 1e0 0.000e+00 1.0000 0.0 0.00% 25.7 0.06% ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer GGGTTTTGAAGGATGARTAGGAGTT 1e0 0.000e+00 1.0000 0.0 0.00% 9.1 0.02% ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer GCACAYAGTAGGKCY 1e0 0.000e+00 1.0000 0.0 0.00% 122.4 0.27% ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer YTKGATAHAGTATTCTWGGTNGGCA 1e0 0.000e+00 1.0000 0.0 0.00% 302.9 0.66% ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer AAGGKGRCGCAGGCA 1e0 0.000e+00 1.0000 0.0 0.00% 279.6 0.61% ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer MACCTTCYATGGCTCCCTAKTGCCY 1e0 0.000e+00 1.0000 0.0 0.00% 33.1 0.07% ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer GNCTGTASTRNTGBCTCHTT 1e0 0.000e+00 1.0000 0.0 0.00% 91.3 0.20% ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer CCTCATGGTGYCYTWYTCCCTTGTG 1e0 0.000e+00 1.0000 0.0 0.00% 87.9 0.19% ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer AGAAATGACTTCCCT 1e0 0.000e+00 1.0000 0.0 0.00% 18.5 0.04% ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer GARTGGTCATCGCCC 1e0 0.000e+00 1.0000 0.0 0.00% 170.8 0.37% ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer RHHCAGAGAGGB 1e0 0.000e+00 1.0000 0.0 0.00% 118.1 0.26% ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer SMCAGTCWGAKGGAGGAGGC 1e0 0.000e+00 1.0000 0.0 0.00% 136.3 0.30%